RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	FBP2	O00757	339 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	GPR171	O14626	319 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	EIF1B	O60739	113 aa	Known RBP	10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	NPIPB7	O75200	414 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	LYZL6	O75951	148 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	IGHV3-9	P01782	118 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	VIM	P08670	466 aa	Known RBP	10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	COX5A	P20674	150 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	IGHV1-2	P23083	117 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	SLC6A2	P23975	617 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	IL32	P24001	234 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	HTR2A	P28223	471 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	ADSL	P30566	484 aa	Predicted RBP	10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	IDUA	P35475	653 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	CEACAM7	Q14002	265 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	CAPRIN1	Q14444	709 aa	Known RBP	10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	SLC17A1	Q14916	467 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	OR7A5	Q15622	319 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	DEFB113	Q30KQ7	82 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	BEX5	Q5H9J7	111 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	PAQR6	Q6TCH4	344 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	SEZ6L2	Q6UXD5	910 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	NET1	Q7Z628	596 aa	Predicted RBP	10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF100	Q8IYN0	542 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	HIPK4	Q8NE63	616 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	CCDC134	Q9H6E4	229 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	C2CD3	Q4AC94	2353 aa		10.4	□□□□□ -0.74
PSMC3-205	ENST00000528362	MPDZ	O75970	2070 aa		10.4	□□□□□ -0.75
PSMC3-205	ENST00000528362		A0A1B0GWA3	101 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	AQP7P3	A6NL99	342 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	FXYD1	O00168	92 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	AKR7A3	O95154	331 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	CNOT4	O95628	575 aa	Known RBP	10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	GPI	P06744	558 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	P2RY4	P51582	365 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	ARFIP2	P53365	341 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	PCBP3	P57721	371 aa	Known RBP	10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	DMTN	Q08495	405 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	RBBP4	Q09028	425 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	TAB1	Q15750	504 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	CYP51A1	Q16850	503 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	HSP90B2P	Q58FF3	399 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	C1orf140	Q5VVS0	124 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	ALKBH2	Q6NS38	261 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	C6orf89	Q6UWU4	347 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	TMEM99	Q8N816	258 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	C11orf65	Q8NCR3	313 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	STK35	Q8TDR2	534 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	APH1A	Q96BI3	265 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	PLPPR2	Q96GM1	343 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	ZNF607	Q96SK3	696 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	WFDC6	Q9BQY6	131 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	TMEM204	Q9BSN7	226 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	NAA11	Q9BSU3	229 aa	Predicted RBP	10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	PTDSS2	Q9BVG9	487 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	SPATA5L1	Q9BVQ7	753 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	KAT8	Q9H7Z6	458 aa	Known RBP	10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	UBTD1	Q9HAC8	227 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	MED4	Q9NPJ6	270 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	SAR1A	Q9NR31	198 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	MALT1	Q9UDY8	824 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	ANGPT4	Q9Y264	503 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	FLVCR1	Q9Y5Y0	555 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	NF1	P21359	2839 aa		10.39	□□□□□ -0.75
PSMC3-205	ENST00000528362	IGKV1D-42	A0A075B6H8	117 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	PRORSD1P	A6NEY8	169 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	MRPL33	O75394	65 aa	Known RBP	10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	MFN2	O95140	757 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	PLAU	P00749	431 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	NR1H2	P55055	460 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	EGR4	Q05215	589 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	KLF10	Q13118	480 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	ACKR1	Q16570	336 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	TRMT5	Q32P41	509 aa	Known RBP	10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	FBXW9	Q5XUX1	488 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	CASP12	Q6UXS9	341 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	ARMC8	Q8IUR7	673 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	LSMEM1	Q8N8F7	131 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	ZIC4	Q8N9L1	334 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	SMYD1	Q8NB12	490 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	OR9K2	Q8NGE7	335 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	HSD17B8	Q92506	261 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	PRR14	Q9BWN1	585 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	ADPRHL2	Q9NX46	363 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	TES	Q9UGI8	421 aa	Known RBP	10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	SLC9A8	Q9Y2E8	581 aa		10.38	□□□□□ -0.75
PSMC3-205	ENST00000528362	MTOR	P42345	2549 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	FTCDNL1	E5RQL4	147 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	TPST2	O60704	377 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	FZD7	O75084	574 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	SERPINB7	O75635	380 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	AHSA1	O95433	338 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	OPN1SW	P03999	348 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	GGT1	P19440	569 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	PCGF2	P35227	344 aa		10.37	□□□□□ -0.75
PSMC3-205	ENST00000528362	PRRC2A	P48634	2157 aa	Known RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms