RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 GSPT2Q8IYD1 628 aaKnown RBP13.78□□□□□ -0.2
CTTN-212ENST00000527962 CLEC4FQ8N1N0 589 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 TMEM45BQ96B21 275 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 DNAJA3Q96EY1 480 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 VRK1Q99986 396 aaPredicted RBP13.78□□□□□ -0.2
CTTN-212ENST00000527962 SF3B5Q9BWJ5 86 aaKnown RBP13.78□□□□□ -0.2
CTTN-212ENST00000527962 DPY30Q9C005 99 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 PIF1Q9H611 641 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 ZDHHC2Q9UIJ5 367 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 MOKQ9UQ07 419 aa13.78□□□□□ -0.2
CTTN-212ENST00000527962 OR6C65A6NJZ3 312 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 B9A039 149 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 CPSF4O95639 269 aaKnown RBP13.77□□□□□ -0.21
CTTN-212ENST00000527962 GPIP06744 558 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 NUDT17P0C025 328 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 CDH2P19022 906 aaPredicted RBP13.77□□□□□ -0.21
CTTN-212ENST00000527962 IGFBP5P24593 272 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 SLC1A3P43003 542 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 SLC17A1Q14916 467 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 DPY19L1Q2PZI1 675 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 AAED1Q7RTV5 226 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 TRIML2Q8N7C3 387 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 ARIH2OSQ8N7S6 290 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 TCP10LQ8TDR4 215 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 RAB8BQ92930 207 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 C3orf49Q96BT1 292 aa13.77□□□□□ -0.21
CTTN-212ENST00000527962 MARCOQ9UEW3 520 aaPredicted RBP13.77□□□□□ -0.21
CTTN-212ENST00000527962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.76□□□□□ -0.213e-14■■■■□ 20.7
CTTN-212ENST00000527962 VWC2LB2RUY7 222 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 LY6HO94772 140 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 TGFAP01135 160 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 CXCR1P25024 350 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 TACR3P29371 465 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 UBE2NP61088 152 aaKnown RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 GSTA3Q16772 222 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 OTUD3Q5T2D3 398 aaPredicted RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 SAXO2Q658L1 398 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 TMEM225Q6GV28 225 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 UGT2A3Q6UWM9 527 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 FRRS1Q6ZNA5 592 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 GPAT4Q86UL3 456 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 ZNF440Q8IYI8 595 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 KIRREL3Q8IZU9 778 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 MSI2Q96DH6 328 aaKnown RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 NEURL3Q96EH8 262 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 BOD1Q96IK1 185 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 ZNF317Q96PQ6 595 aaPredicted RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 TRNT1Q96Q11 434 aaKnown RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 KATNB1Q9BVA0 655 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 TAPBPLQ9BX59 468 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 RAB1BQ9H0U4 201 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 MTHFD2LQ9H903 347 aaPredicted RBP13.76□□□□□ -0.21
CTTN-212ENST00000527962 CA10Q9NS85 328 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 SLC17A7Q9P2U7 560 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 OSGIN1Q9UJX0 560 aa13.76□□□□□ -0.21
CTTN-212ENST00000527962 CFAP73A6NFT4 308 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 ZNF587BE7ETH6 402 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 FAAHO00519 579 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 SCN2BO60939 215 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 PDE5AO76074 875 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 SNUPNO95149 360 aaKnown RBP13.75□□□□□ -0.21
CTTN-212ENST00000527962 VAMP5O95183 116 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 IL7RP16871 459 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 ZNF23P17027 643 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
CTTN-212ENST00000527962 COPZ1P61923 177 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 MST1LQ2TV78 715 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 SPATA19Q7Z5L4 167 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 ANKRD46Q86W74 232 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 TESCQ96BS2 214 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 ZG16BQ96DA0 208 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 AURKBQ96GD4 344 aaPredicted RBP13.75□□□□□ -0.21
CTTN-212ENST00000527962 SORCS2Q96PQ0 1159 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 SLC38A2Q96QD8 506 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 SLC35A5Q9BS91 424 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 CUBNO60494 3623 aa13.75□□□□□ -0.21
CTTN-212ENST00000527962 TMEM72A0PK05 275 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 AGAP5A6NIR3 686 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 KLF11O14901 512 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 BCAS1O75363 584 aaPredicted RBP13.74□□□□□ -0.21
CTTN-212ENST00000527962 SPAG7O75391 227 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 PGRP06401 933 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 BPGMP07738 259 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 IMPDH2P12268 514 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 SLC25A3Q00325 362 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 LRRC74AQ0VAA2 488 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 CEACAM7Q14002 265 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 HIKESHIQ53FT3 197 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 NUDCD3Q8IVD9 361 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 OR4F15Q8NGB8 312 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 OR9K2Q8NGE7 335 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms