RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 CST9Q5W186 159 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 SFRP4Q6FHJ7 346 aaPredicted RBP6.95□□□□□ -1.3
SOX6-208ENST00000527619 KLHL24Q6TFL4 600 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 SCD5Q86SK9 330 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 CBLN2Q8IUK8 224 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 DCUN1D3Q8IWE4 304 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
SOX6-208ENST00000527619 OR6V1Q8N148 313 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 RELL2Q8NC24 303 aaPredicted RBP6.95□□□□□ -1.3
SOX6-208ENST00000527619 FAM98AQ8NCA5 519 aaKnown RBP6.95□□□□□ -1.3
SOX6-208ENST00000527619 OR6J1Q8NGC5 347 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 OR6K3Q8NGY3 331 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 SPRYD4Q8WW59 207 aaPredicted RBP6.95□□□□□ -1.3
SOX6-208ENST00000527619 IGSF8Q969P0 613 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 RGMAQ96B86 450 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 ZFP3Q96NJ6 502 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 AMDHD1Q96NU7 426 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 ELP3Q9H9T3 547 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 FAM86C1Q9NVL1 165 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 VPS29Q9UBQ0 182 aa6.95□□□□□ -1.3
SOX6-208ENST00000527619 MRPS18CQ9Y3D5 142 aaKnown RBP6.95□□□□□ -1.3
SOX6-208ENST00000527619 A0A1W2PPC1 479 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 ARPC1BO15143 372 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 INSIG1O15503 277 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 CREBL2O60519 120 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 ZNF821O75541 412 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 SPDEFO95238 335 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 EGFP01133 1207 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 IGF2P01344 180 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 NPSP0C0P6 89 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 ZNF286BP0CG31 522 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 UBBP0CG47 229 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 UBCP0CG48 685 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 AKR1A1P14550 325 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 GJA5P36382 358 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 OPRD1P41143 372 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 RPS27AP62979 156 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 UBA52P62987 128 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 ACSM2AQ08AH3 577 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 TRA2AQ13595 282 aaKnown RBP eCLIP6.94□□□□□ -1.3
SOX6-208ENST00000527619 SF1Q15637 639 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 NDUFA9Q16795 377 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 RNASE10Q5GAN6 216 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 TMEM255AQ5JRV8 349 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 ACSM2BQ68CK6 577 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 KIAA1161Q6NSJ0 714 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 FBXO42Q6P3S6 717 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SMARCD3Q6STE5 483 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 UQCC3Q6UW78 93 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 BAIAP2L2Q6UXY1 529 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 CD300LDQ6UXZ3 194 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 LBX2Q6XYB7 198 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 CXXC5Q7LFL8 322 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 TMCO2Q7Z6W1 182 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SKA3Q8IX90 412 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 CDK20Q8IZL9 346 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 GJD3Q8N144 294 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 ARMC10Q8N2F6 343 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 BBS1Q8NFJ9 593 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 OR5J2Q8NH18 312 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 OR56A3Q8NH54 315 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 OR14A16Q8NHC5 309 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SP7Q8TDD2 431 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 C16orf78Q8WTQ4 265 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 APOBEC4Q8WW27 367 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 PNPLA2Q96AD5 504 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SPACA9Q96E40 222 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 BCO1Q9HAY6 547 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 BARX1Q9HBU1 254 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 GPN1Q9HCN4 374 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 ARL15Q9NXU5 204 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 GULP1Q9UBP9 304 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SRPK3Q9UPE1 567 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 PIN4Q9Y237 131 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 PLEKHM1Q9Y4G2 1056 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 MAP4K5Q9Y4K4 846 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 FXYD6-FXYD2A0A087WZ82 144 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 OR6C68A6NDL8 312 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 PGRMC2O15173 223 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 KCNAB3O43448 404 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 NME6O75414 186 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 MMP3P08254 477 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SHC1P29353 583 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 GDNFP39905 211 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SLC11A1P49279 550 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 OR10A3P58181 314 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SMIM11AP58511 58 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 HBA1P69905 142 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 MELKQ14680 651 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 ZNF791Q3KP31 576 aaPredicted RBP6.94□□□□□ -1.3
SOX6-208ENST00000527619 ELFN2Q5R3F8 820 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 FBXL22Q6P050 247 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 MTFR2Q6P444 385 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 NHLRC1Q6VVB1 395 aa6.94□□□□□ -1.3
SOX6-208ENST00000527619 SERPINA9Q86WD7 417 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms