RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SRXN1Q9BYN0 137 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 PRDM14Q9GZV8 571 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 REEP1Q9H902 201 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 S100A14Q9HCY8 104 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 MEPEQ9NQ76 525 aaPredicted RBP12.32□□□□□ -0.44
CD44-224ENST00000526669 ARMC1Q9NVT9 282 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 SAMHD1Q9Y3Z3 626 aaKnown RBP12.32□□□□□ -0.44
CD44-224ENST00000526669 LYVE1Q9Y5Y7 322 aa12.32□□□□□ -0.44
CD44-224ENST00000526669 NCOA6Q14686 2063 aaPredicted RBP12.32□□□□□ -0.44
CD44-224ENST00000526669 TRAV36DV7A0A075B6V5 113 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 OR14I1A6ND48 311 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 GJE1A6NN92 205 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 PYCARD-AS1I3L0S3 204 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 SULT2B1O00204 365 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 BCKDKO14874 412 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 CLOCKO15516 846 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
CD44-224ENST00000526669 NPIPB7O75200 414 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 IFI30P13284 250 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 IDUAP35475 653 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 DIO1P49895 249 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 SMIM11AP58511 58 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 RPS3AP61247 264 aaKnown RBP12.31□□□□□ -0.44
CD44-224ENST00000526669 LTBQ06643 244 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 SGCBQ16585 318 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 ESPNLQ6ZVH7 1005 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 NRMQ8IXM6 262 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 ACOT11Q8WXI4 607 aaPredicted RBP12.31□□□□□ -0.44
CD44-224ENST00000526669 OSTF1Q92882 214 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 PKP2Q99959 881 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 TMEM43Q9BTV4 400 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 ZNF426Q9BUY5 554 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 PTDSS2Q9BVG9 487 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 SEMA6AQ9H2E6 1030 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 TINAGQ9UJW2 476 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 PRDM4Q9UKN5 801 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 TMCC3Q9ULS5 477 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 MED31Q9Y3C7 131 aa12.31□□□□□ -0.44
CD44-224ENST00000526669 A0A1W2PRQ8 180 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 CLCA1A8K7I4 914 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 H0YHG0 523 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 SLC19A2O60779 497 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 DEAF1O75398 565 aaPredicted RBP12.3□□□□□ -0.44
CD44-224ENST00000526669 E2F6O75461 281 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 BAG2O95816 211 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 CH25HO95992 272 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 LDLRP01130 860 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 BGLAPP02818 100 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 CPN1P15169 458 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 FUT1P19526 365 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 FASP25445 335 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 RBM34P42696 430 aaKnown RBP12.3□□□□□ -0.44
CD44-224ENST00000526669 GPR4P46093 362 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 UQCRFS1P47985 274 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 CARD18P57730 90 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 DGCR6Q14129 220 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 ATP6AP1Q15904 470 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 BCL2A1Q16548 175 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 PDSS1Q5T2R2 415 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 ZFP1Q6P2D0 407 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 TMPPEQ6ZT21 453 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 CHMP1BQ7LBR1 199 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 RRM2BQ7LG56 351 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 PM20D2Q8IYS1 436 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 HS3ST5Q8IZT8 346 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 RPRMLQ8N4K4 120 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 OR4K5Q8NGD3 323 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 OR9Q2Q8NGE9 314 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 OR4C15Q8NGM1 316 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 FAM46AQ96IP4 442 aaKnown RBP12.3□□□□□ -0.44
CD44-224ENST00000526669 HS6ST2Q96MM7 605 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 MOGAT1Q96PD6 335 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 TRIB1Q96RU8 372 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 EPYCQ99645 322 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 FUZQ9BT04 418 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 TAPBPLQ9BX59 468 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 POTEKPQ9BYX7 375 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 ANKRD19PQ9H560 264 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 DNAJB9Q9UBS3 223 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 SEC14L4Q9UDX3 406 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 OSGIN2Q9Y236 505 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 HDGFL3Q9Y3E1 203 aa12.3□□□□□ -0.44
CD44-224ENST00000526669 TRGV8A0A0C4DH27 118 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 SH3PXD2BA1X283 911 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 LIPT2A6NK58 231 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 PRRG2O14669 202 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 OR10H3O60404 316 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 CCNB2O95067 398 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 AKR7A3O95154 331 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 PMS2P2O95744 297 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 FCGR1AP12314 374 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
CD44-224ENST00000526669 MAKP20794 623 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 FPR1P21462 350 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 GNLYP22749 145 aa12.29□□□□□ -0.44
CD44-224ENST00000526669 GTF2E2P29084 291 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms