RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 EGR4Q05215 589 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 PMPCAQ10713 525 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 ST3GAL3Q11203 375 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 PIN1Q13526 163 aaPredicted RBP18.59■□□□□ 0.57
CD44-222ENST00000526025 HSPB2Q16082 182 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 EEF1A1P5Q5VTE0 462 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 C1orf140Q5VVS0 124 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 GDF7Q7Z4P5 450 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 ZHX1-C8orf76Q96EF9 292 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 LRGUKQ96M69 825 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 EPYCQ99645 322 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 SRXN1Q9BYN0 137 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 ANKRD19PQ9H560 264 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 RNF122Q9H9V4 155 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 GP6Q9HCN6 339 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 GLRX2Q9NS18 164 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 SLC7A8Q9UHI5 535 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 RIMS3Q9UJD0 308 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 SLC7A7Q9UM01 511 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 POMPQ9Y244 141 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 TENM4Q6N022 2769 aa18.59■□□□□ 0.57
CD44-222ENST00000526025 OR2T1O43869 369 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 EIF1BO60739 113 aaKnown RBP18.58■□□□□ 0.56
CD44-222ENST00000526025 PRSS23O95084 383 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 AHSA1O95433 338 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 LDLRP01130 860 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 IGF2P01344 180 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 IL2RAP01589 272 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 RHCEP18577 417 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 P4HA3Q7Z4N8 544 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 TSEN54Q7Z6J9 526 aaKnown RBP18.58■□□□□ 0.56
CD44-222ENST00000526025 SLC43A2Q8N370 569 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 C9orf106Q8NAJ2 232 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 MFSD8Q8NHS3 518 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 FNDC9Q8TBE3 224 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 RNF128Q8TEB7 428 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 HS6ST2Q96MM7 605 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 ZNF300Q96RE9 604 aaPredicted RBP18.58■□□□□ 0.56
CD44-222ENST00000526025 PRSS27Q9BQR3 290 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 IL1RAPQ9NPH3 570 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 NDUFAF4Q9P032 175 aa18.58■□□□□ 0.56
CD44-222ENST00000526025 TRAV36DV7A0A075B6V5 113 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 HTR3EA5X5Y0 456 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 LIPT2A6NK58 231 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 KDM4EB2RXH2 506 aaPredicted RBP18.57■□□□□ 0.56
CD44-222ENST00000526025 TOXO94900 526 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 AGFG2O95081 481 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 TGM6O95932 706 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 GPIP06744 558 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 IMPDH2P12268 514 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 ENPP1P22413 925 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 H3F3AP84243 136 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 VLDLRP98155 873 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 SRSF1Q07955 248 aaKnown RBP eCLIP18.57■□□□□ 0.56
CD44-222ENST00000526025 FLOT2Q14254 428 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 MFSD13AQ14CX5 517 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 RNPS1Q15287 305 aaKnown RBP18.57■□□□□ 0.56
CD44-222ENST00000526025 IQCCQ4KMZ1 466 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 FAM69AQ5T7M9 428 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 GTF2IRD2BQ6EKJ0 949 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 PIWIL3Q7Z3Z3 882 aaKnown RBP18.57■□□□□ 0.56
CD44-222ENST00000526025 GTF2IRD2Q86UP8 949 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 ASB5Q8WWX0 329 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 PTDSS2Q9BVG9 487 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 FNDC11Q9BVV2 318 aa18.57■□□□□ 0.56
CD44-222ENST00000526025 FAM32AQ9Y421 112 aaKnown RBP18.57■□□□□ 0.56
CD44-222ENST00000526025 FTCDNL1E5RQL4 147 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 FFAR1O14842 300 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 IL18BPO95998 194 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 UMPSP11172 480 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 MAGEA2P43356 314 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 TRAM2Q15035 370 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 TTC33Q6PID6 262 aaPredicted RBP18.56■□□□□ 0.56
CD44-222ENST00000526025 XKRXQ6PP77 449 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 PAQR6Q6TCH4 344 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 WDR88Q6ZMY6 472 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 FCRLAQ7L513 359 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 ZNF808Q8N4W9 903 aaPredicted RBP18.56■□□□□ 0.56
CD44-222ENST00000526025 PIK3C3Q8NEB9 887 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 RNF217Q8TC41 542 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 DHRS1Q96LJ7 313 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 TAPBPLQ9BX59 468 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 PRRG4Q9BZD6 226 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 COQ3Q9NZJ6 369 aa18.56■□□□□ 0.56
CD44-222ENST00000526025 ZNF629Q9UEG4 869 aaPredicted RBP18.56■□□□□ 0.56
CD44-222ENST00000526025 CACNA1CQ13936 2221 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 A0A0G2JNJ9 132 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 CYTIPO60759 359 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 AQP8O94778 261 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 FABP3P05413 133 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 CHRNB4P30926 498 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 OR2B6P58173 313 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 PDK3Q15120 406 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 GUSBP1Q15486 140 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 FAM98BQ52LJ0 330 aaKnown RBP18.55■□□□□ 0.56
CD44-222ENST00000526025 ABLIM2Q6H8Q1 611 aa18.55■□□□□ 0.56
CD44-222ENST00000526025 ITLN2Q8WWU7 325 aaPredicted RBP18.55■□□□□ 0.56
CD44-222ENST00000526025 KTI12Q96EK9 354 aaPredicted RBP18.55■□□□□ 0.56
CD44-222ENST00000526025 GMPPAQ96IJ6 420 aaPredicted RBP18.55■□□□□ 0.56
CD44-222ENST00000526025 ZNF347Q96SE7 839 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms