RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 VDAC2P45880 294 aaPredicted RBP2.46□□□□□ -2.02
COPB1-203ENST00000525214 RPS14P62263 151 aaKnown RBP2.46□□□□□ -2.02
COPB1-203ENST00000525214 DPY19L4Q7Z388 723 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 MSANTD4Q8NCY6 345 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 DTX3LQ8TDB6 740 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 ASB9Q96DX5 294 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 GSDMCQ9BYG8 508 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 ROGDIQ9GZN7 287 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 VAT1LQ9HCJ6 419 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 NUDT15Q9NV35 164 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 ALG6Q9Y672 507 aa2.46□□□□□ -2.02
COPB1-203ENST00000525214 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
COPB1-203ENST00000525214 DCTN6O00399 190 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 AGPAT2O15120 278 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 VPS26AO75436 327 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 SUPT3HO75486 399 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 IGLV2-23P01705 113 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 DCNP07585 359 aaKnown RBP2.45□□□□□ -2.02
COPB1-203ENST00000525214 FGF9P31371 208 aaPredicted RBP2.45□□□□□ -2.02
COPB1-203ENST00000525214 CNTN2Q02246 1040 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 HSF2Q03933 536 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 SLC10A5Q5PT55 438 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 MISPQ8IVT2 679 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 FTMTQ8N4E7 242 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 CATSPER1Q8NEC5 780 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 MYLPFQ96A32 169 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 MRPL38Q96DV4 380 aaKnown RBP2.45□□□□□ -2.02
COPB1-203ENST00000525214 C12orf66Q96MD2 445 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 SLC35A5Q9BS91 424 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 SUDS3Q9H7L9 328 aaPredicted RBP2.45□□□□□ -2.02
COPB1-203ENST00000525214 ZNF226Q9NYT6 803 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 CLCF1Q9UBD9 225 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 MGAT4BQ9UQ53 548 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 NUP214P35658 2090 aaPredicted RBP2.45□□□□□ -2.02
COPB1-203ENST00000525214 BRWD3Q6RI45 1802 aa2.45□□□□□ -2.02
COPB1-203ENST00000525214 IGSF9BQ9UPX0 1349 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 IGLV11-55A0A075B6I3 123 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 G3V4G9 280 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 LANCL1O43813 399 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 CD5LO43866 347 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 OR4F21O95013 312 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 TSPY4P0CV99 314 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 TSPY10P0CW01 314 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 PPIAL4GP0DN37 164 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 MUC1P15941 1255 aaPredicted RBP2.44□□□□□ -2.02
COPB1-203ENST00000525214 KIF5BP33176 963 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 RIPK1Q13546 671 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 GNMTQ14749 295 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 CDC37Q16543 378 aaPredicted RBP2.44□□□□□ -2.02
COPB1-203ENST00000525214 TMEM183BQ1AE95 376 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 TRIM16LQ309B1 348 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 LRRC10Q5BKY1 277 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 SYT10Q6XYQ8 523 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 PAQR7Q86WK9 346 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 TMEM183AQ8IXX5 376 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 MYOCDQ8IZQ8 938 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 ZNF713Q8N859 430 aaPredicted RBP2.44□□□□□ -2.02
COPB1-203ENST00000525214 MRPS31Q92665 395 aaKnown RBP2.44□□□□□ -2.02
COPB1-203ENST00000525214 NAT9Q9BTE0 207 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 DEFB127Q9H1M4 99 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 FOLH1BQ9HBA9 442 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 SIRT7Q9NRC8 400 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 SIGLEC8Q9NYZ4 499 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 AIPL1Q9NZN9 384 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 TRAF3IP3Q9Y228 551 aa2.44□□□□□ -2.02
COPB1-203ENST00000525214 COL27A1Q8IZC6 1860 aaPredicted RBP2.43□□□□□ -2.02
COPB1-203ENST00000525214 A0A1B0GUS0 222 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 BICDL2A1A5D9 508 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 BET1O15155 118 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 CTAGE5O15320 804 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 ADCY5O95622 1261 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 STAMBPO95630 424 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 CISD3P0C7P0 127 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 FMO3P31513 532 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 BTCP35070 178 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 DAP3P51398 398 aaKnown RBP2.43□□□□□ -2.02
COPB1-203ENST00000525214 STARD6P59095 220 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 CEBPEQ15744 281 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 BCL7AQ4VC05 210 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 TIGD3Q6B0B8 471 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 ZNF571Q7Z3V5 609 aaPredicted RBP2.43□□□□□ -2.02
COPB1-203ENST00000525214 DENND6BQ8NEG7 585 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 LINC00477Q96M19 166 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 GSTK1Q9Y2Q3 226 aa2.43□□□□□ -2.02
COPB1-203ENST00000525214 BAG2O95816 211 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 C6orf47O95873 294 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 HSD17B7P56937 341 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 REG3AQ06141 175 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 KIAA0087Q14695 138 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 ATP6AP1Q15904 470 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 RAET1GQ6H3X3 334 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 CBLN3Q6UW01 205 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 ZNF620Q6ZNG0 422 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 CATSPER4Q7RTX7 472 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 ARRDC1Q8N5I2 433 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 FAM86B1Q8N7N1 296 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 RMI2Q96E14 147 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 ALG12Q9BV10 488 aa2.42□□□□□ -2.02
COPB1-203ENST00000525214 MRPL13Q9BYD1 178 aaKnown RBP2.42□□□□□ -2.02
COPB1-203ENST00000525214 AATFQ9NY61 560 aaKnown RBP eCLIP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms