RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MYO6Q9UM54 1294 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 AP3M1Q9Y2T2 418 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 MBD5Q9P267 1494 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ADGRA3Q8IWK6 1321 aa3.96□□□□□ -1.77
CD44-213ENST00000525209 ADGRB3O60242 1522 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 TRPM2O94759 1503 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 A0A1W2PRF3 423 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 A0A1W2PRM7 423 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 SLC22A23A1A5C7 686 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 SAGE2PA6NJ88 616 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 C15orf62A8K5M9 175 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ERVV-1B6SEH8 477 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CCSO14618 274 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CASKO14936 926 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MSH4O15457 936 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CFLARO15519 480 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 EFNA2O43921 213 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ZIC3O60481 467 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 SEMA7AO75326 666 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 TOXO94900 526 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 PLAUP00749 431 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 FGGP02679 453 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 GCP02774 474 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 PRKCGP05129 697 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 H1F0P07305 194 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 GSTA1P08263 222 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 KRT16P08779 473 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 PET100P0DJ07 73 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CALM1P0DP23 149 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CALM2P0DP24 149 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CALM3P0DP25 149 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 CHRNB1P11230 501 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 NDUFB7P17568 137 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ATF6P18850 670 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 HMGB2P26583 209 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 GPR1P46091 355 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 RFX5P48382 616 aaPredicted RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 PGFP49763 221 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 HLCSP50747 726 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 XKP51811 444 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 KPNA2P52292 529 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 PKNOX1P55347 436 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ERVS71-1P61550 626 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 RPS6P62753 249 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 NHLH1Q02575 133 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MGAT3Q09327 533 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 OPCMLQ14982 345 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 KCTD19Q17RG1 926 aaPredicted RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 SLC25A52Q3SY17 297 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 SLC36A2Q495M3 483 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 C1orf220Q5T0J3 134 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ARMCX5Q6P1M9 558 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MOB2Q70IA6 237 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ABHD13Q7L211 337 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ITIH5Q86UX2 942 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 METTL4Q8N3J2 472 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 OR56A4Q8NGH8 313 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 OR4Q3Q8NH05 313 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 OR2L2Q8NH16 312 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 TFGQ92734 400 aaPredicted RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 CDS1Q92903 461 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 PCED1BQ96HM7 432 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 TXNDC15Q96J42 360 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 PACRGQ96M98 296 aaPredicted RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 RNF145Q96MT1 663 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 TOX2Q96NM4 488 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MCCC1Q96RQ3 725 aaPredicted RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 KXD1Q9BQD3 176 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 DCTN5Q9BTE1 182 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 PAPOLGQ9BWT3 736 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 UCK2Q9BZX2 261 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 NXF5Q9H1B4 397 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 CXXC4Q9H2H0 198 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 KLHL31Q9H511 634 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 AAMDCQ9H7C9 122 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 NIPAL2Q9H841 368 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MOV10Q9HCE1 1003 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 PLCXD1Q9NUJ7 323 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 DCAF13Q9NV06 445 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 SLC38A7Q9NVC3 462 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 RMND1Q9NWS8 449 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 NDE1Q9NXR1 346 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MRPL39Q9NYK5 338 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 IL36AQ9UHA7 158 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ZNHIT2Q9UHR6 403 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 SLC22A13Q9Y226 551 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 EIF3LQ9Y262 564 aaKnown RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 V9GYY9 64 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 ARID1BQ8NFD5 2236 aaPredicted RBP3.96□□□□□ -1.78
CD44-213ENST00000525209 PLEKHG1Q9ULL1 1385 aa3.96□□□□□ -1.78
CD44-213ENST00000525209 MAPK8IP3Q9UPT6 1336 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 MYOM3Q5VTT5 1437 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 AHDC1Q5TGY3 1603 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 MARF1Q9Y4F3 1742 aaKnown RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 ARHGAP23Q9P227 1491 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 A0A0J9YVX5 310 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 TEX13DA0A0J9YY54 714 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 GAGE12BA1L429 117 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GAGE12HA6NDE8 117 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GOLGA6L9A6NEM1 432 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms