RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SLC25A48Q6ZT89 311 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 TSEN54Q7Z6J9 526 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 OR4N5Q8IXE1 308 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 IQCKQ8N0W5 287 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 SLC39A11Q8N1S5 342 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ZNF383Q8NA42 475 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CLEC18CQ8NCF0 446 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 KBTBD8Q8NFY9 601 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 OR10V1Q8NGI7 309 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 OR52H1Q8NGJ2 320 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 OR2L8Q8NGY9 312 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 APOBEC4Q8WW27 367 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 OMA1Q96E52 524 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ZBED6CLQ96FA7 236 aaPredicted RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 SCMH1Q96GD3 660 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 FAHD2AQ96GK7 314 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 SERPINB11Q96P15 392 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 TNFRSF13CQ96RJ3 184 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 RNF2Q99496 336 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 PAPOLGQ9BWT3 736 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 RAB34Q9BZG1 259 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ACTR3CQ9C0K3 210 aaPredicted RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 NAA50Q9GZZ1 169 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 PIGUQ9H490 435 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 SLC17A6Q9P2U8 582 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ING1Q9UK53 422 aaPredicted RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 TCF19Q9Y242 345 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 GMPPBQ9Y5P6 360 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CDH10Q9Y6N8 788 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 EVC2Q86UK5 1308 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 ADGRA3Q8IWK6 1321 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 IGLV9-49A0A0B4J1Y8 123 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 A0A0G2JLW4 131 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 hCG_38984A0A1B0GV85 526 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 A0A1W2PPI3 338 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 ZNF587BE7ETH6 402 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 H3BMQ9 156 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 BLOC1S5-TXNDC5H3BN57 136 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 GOLGA8MH3BSY2 632 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 LIN7AO14910 233 aaPredicted RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 ATP6V0E1O15342 81 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 ADAP1O75689 374 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 ZNF189O75820 626 aaPredicted RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 ZMPSTE24O75844 475 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 RETP07949 1114 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 SERPINA6P08185 405 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 KRT16P08779 473 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 UBTFL1P0CB47 393 aaPredicted RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 PRSS56P0CW18 603 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 MGMTP16455 207 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 PGAM1P18669 254 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 KDELR2P33947 212 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 EPHX2P34913 555 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 SAA4P35542 130 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 CDKN2CP42773 168 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 MAGEA6P43360 314 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 XCR1P46094 333 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 OR3A2P47893 321 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 SELENOPP49908 381 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 EMDP50402 254 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 ABCE1P61221 599 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 CHRNB3Q05901 458 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 SCRN3Q0VDG4 424 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 LAGE3Q14657 143 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 KIR2DS3Q14952 304 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 CALCRLQ16602 461 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 DUSP7Q16829 419 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 UNC50Q53HI1 259 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 PAN3Q58A45 887 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 COQ5Q5HYK3 327 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 KHDRBS2Q5VWX1 349 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 TMEM207Q6UWW9 146 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 C3P1Q6ZMU1 363 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 LEKR1Q6ZMV7 388 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 SFR1Q86XK3 245 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 APOBEC3FQ8IUX4 373 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 CMTM1Q8IZ96 169 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 METTL4Q8N3J2 472 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 C15orf54Q8N8G6 183 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 ATP6V0D2Q8N8Y2 350 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 CDRT4Q8N9R6 151 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 LYPD6BQ8NI32 183 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 SETD7Q8WTS6 366 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 PPP1R14BQ96C90 147 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 FAF2Q96CS3 445 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 DERL2Q9GZP9 239 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 KLK15Q9H2R5 256 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 Q9HAA7 133 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 RETNQ9HD89 108 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 FGF20Q9NP95 211 aaPredicted RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 TEX10Q9NXF1 929 aaPredicted RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 ABCD2Q9UBJ2 740 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 RALYQ9UKM9 306 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 YARS2Q9Y2Z4 477 aaKnown RBP3.45□□□□□ -1.86
SKP1-209ENST00000522552 V9GYY9 64 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 COL4A3Q01955 1670 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 FRMPD3Q5JV73 1810 aa3.45□□□□□ -1.86
SKP1-209ENST00000522552 A0A1B0GVT2 93 aa3.44□□□□□ -1.86
SKP1-209ENST00000522552 A0A1W2PRF3 423 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms