RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 USP43Q70EL4 1123 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 BCORP1Q8N888 145 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 OR6Q1Q8NGQ2 317 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 EFHD2Q96C19 240 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 SLC38A2Q96QD8 506 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 TAPBPLQ9BX59 468 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 DCSTAMPQ9H295 470 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 AKIP1Q9NQ31 210 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 DIMT1Q9UNQ2 313 aaKnown RBP20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 B3GNT3Q9Y2A9 372 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 TP53TG5Q9Y2B4 290 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 CLDN25C9JDP6 229 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 REM1O75628 298 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 CD97P48960 835 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 CYB561P49447 251 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 FBXW4P57775 412 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 ARG2P78540 354 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 MED22Q15528 200 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 OR1Q1Q15612 314 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 ANKDD1AQ495B1 522 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 KLHL22Q53GT1 634 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 DESI1Q6ICB0 168 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 IGFL2Q6UWQ7 119 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 NANOGP1Q8N7R0 232 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 PROKR2Q8NFJ6 384 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 S100ZQ8WXG8 99 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 SPACA9Q96E40 222 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 ZNF71Q9NQZ8 489 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 HPF1Q9NWY4 346 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 CORINQ9Y5Q5 1042 aa20.1■□□□□ 0.81
PTP4A3-204ENST00000521578 IRGMA1A4Y4 181 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 PRODHO43272 600 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 IGKV1D-16P01601 117 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 SCG5P05408 212 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 FBXO45P0C2W1 286 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 CASRP41180 1078 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 ZNF620Q6ZNG0 422 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 ATCAYQ86WG3 371 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 ADOQ96SZ5 270 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 MND1Q9BWT6 205 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 LRFN1Q9P244 771 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 CSAG2Q9Y5P2 127 aa20.09■□□□□ 0.81
PTP4A3-204ENST00000521578 NPIPA5A0A0B4J1W7 369 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 OR5H15A6NDH6 313 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 SNTNA6NMZ2 147 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 KDM4EB2RXH2 506 aaPredicted RBP20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 NPIPA7E9PJI5 369 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 CCRL2O00421 344 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 PIP5K1CO60331 668 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 PPM1BO75688 479 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 HSMCR30P0CW71 290 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 NPIPA8P0DM63 369 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 IL12BP29460 328 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 TGFBR1P36897 503 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 GAS1P54826 345 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 PLAURQ03405 335 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 TSTQ16762 297 aaKnown RBP20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 ZNF791Q3KP31 576 aaPredicted RBP20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 TIMM50Q3ZCQ8 353 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 SPINK14Q6IE38 97 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 ZAR1Q86SH2 424 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 GRAMD2AQ8IUY3 354 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 CYP4Z2PQ8N1L4 340 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 EXD3Q8N9H8 876 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 KBTBD8Q8NFY9 601 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 OR52I1Q8NGK6 324 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 HAS2Q92819 552 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 OPALINQ96PE5 141 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 SIGLEC12Q96PQ1 595 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 WDR12Q9GZL7 423 aaKnown RBP20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 OR51E2Q9H255 320 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 HMG20AQ9NP66 347 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 FGF20Q9NP95 211 aaPredicted RBP20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 MED17Q9NVC6 651 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 CLEC2DQ9UHP7 191 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 CDH10Q9Y6N8 788 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 A3GALT2U3KPV4 340 aa20.08■□□□□ 0.81
PTP4A3-204ENST00000521578 TSPAN2O60636 221 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 GKN3PP0CG01 181 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 GPR4P46093 362 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 TMED10P49755 219 aaKnown RBP20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 DOC2BQ14184 412 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 SPHARQ15513 63 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 OR1C1Q15619 314 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 FLYWCH1Q4VC44 716 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF227Q86WZ6 799 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 OR10G3Q8NGC4 313 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 OR4Q3Q8NH05 313 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ZNF559Q9BR84 538 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 TEX12Q9BXU0 123 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 RNF32Q9H0A6 362 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.07■□□□□ 0.86e-8■■■■■ 27.8
PTP4A3-204ENST00000521578 EXPH5Q8NEV8 1989 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 NINQ8N4C6 2090 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 BSNQ9UPA5 3926 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 J3QRK9 145 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 RAB36O95755 333 aa20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 ENDOUP21128 410 aaKnown RBP20.07■□□□□ 0.8
PTP4A3-204ENST00000521578 RAB40BQ12829 278 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms