RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 GALNT4Q8N4A0 578 aa6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 POU5F2Q8N7G0 328 aa6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 ZNF837Q96EG3 531 aaPredicted RBP6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 VPS11Q9H270 941 aa6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 HINT3Q9NQE9 182 aaKnown RBP6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 SLC35C2Q9NQQ7 365 aa6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 FBLN5Q9UBX5 448 aa6.36□□□□□ -1.39
HMBOX1-208ENST00000521516 FAM95CA0A1B0GW59 222 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 SCDO00767 359 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 TNFRSF13BO14836 293 aaPredicted RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 NKX2-2O95096 273 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 NUDT14O95848 222 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 ZNF35P13682 527 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 MPIP34949 423 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 ATP6V0D1P61421 351 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 LARS2Q15031 903 aaKnown RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 SYT14P1Q58G82 188 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 LRRN1Q6UXK5 716 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 GSTA5Q7RTV2 222 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 ZC3HC1Q86WB0 502 aaKnown RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 TEX9Q8N6V9 391 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 ZIC4Q8N9L1 334 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 DACT3Q96B18 629 aaPredicted RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 EXOSC8Q96B26 276 aaKnown RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 HES6Q96HZ4 224 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 MAP6Q96JE9 813 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 SHCBP1LQ9BZQ2 653 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 MMP28Q9H239 520 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 CRLF2Q9HC73 371 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 NUDT4Q9NZJ9 180 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 RNF11Q9Y3C5 154 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 ZNF503-AS2A6NEH8 195 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 VGLL3A8MV65 326 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 MYO1GB0I1T2 1018 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 F5H0A9 414 aaPredicted RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 IGHV4-59P01825 116 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 IFI6P09912 130 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 HPGDP15428 266 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 MSX2P35548 267 aaPredicted RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 SEC61A1P61619 476 aaKnown RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 RPS23P62266 143 aaKnown RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 ZNF763Q0D2J5 394 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 SLC17A1Q14916 467 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 PAQR6Q6TCH4 344 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 TMEM107Q6UX40 140 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 RNF144BQ7Z419 303 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 OR6Y1Q8NGX8 325 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 SLC25A43Q8WUT9 341 aaPredicted RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 LRRC39Q96DD0 335 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 DIRC2Q96SL1 478 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 PATZ1Q9HBE1 687 aaKnown RBP6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 TMEM165Q9HC07 324 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 GIMAP4Q9NUV9 329 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 OR5V1Q9UGF6 321 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 CARD8Q9Y2G2 431 aa6.35□□□□□ -1.39
HMBOX1-208ENST00000521516 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 A0A096LPE4 126 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 A0A1W2PPW3 197 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 A0A1W2PPZ6 126 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 ISPDA4D126 451 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 TMEM229AB2RXF0 380 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 DNAJA2O60884 412 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 IER3P46695 156 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 EMX1Q04741 257 aaPredicted RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 QPRTQ15274 297 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 TIGD2Q4W5G0 525 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 CLEC6AQ6EIG7 209 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 TMEM154Q6P9G4 183 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 LDLRAD3Q86YD5 345 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 PHOSPHO1Q8TCT1 267 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 GPR151Q8TDV0 419 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 AURKBQ96GD4 344 aaPredicted RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 QRSL1Q9H0R6 528 aaKnown RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 PALMDQ9NP74 551 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 DDX18Q9NVP1 670 aaKnown RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 IFNKQ9P0W0 207 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 FZR1Q9UM11 496 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 FAM187AA6NFU0 413 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 ZNF587BE7ETH6 402 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 KCNK2O95069 426 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 IGHV2-70P01814 119 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 SNRPBP14678 240 aaKnown RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 CDC25BP30305 580 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 KCNJ1P48048 391 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 SH3BGRP55822 239 aaPredicted RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 SLC3A1Q07837 685 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 NKPD1Q17RQ9 610 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 KLHL26Q53HC5 615 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 DHRS7BQ6IAN0 325 aaPredicted RBP6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 C11orf88Q6PI97 169 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 FRRS1Q6ZNA5 592 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 LINGO2Q7L985 606 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 CMIPQ8IY22 773 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 C11orf44Q8N8P7 122 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 OR4F17Q8NGA8 305 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 OR5W2Q8NH69 310 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 ELP4Q96EB1 424 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 ELMOD3Q96FG2 381 aa6.34□□□□□ -1.39
HMBOX1-208ENST00000521516 FRG2BQ96QU4 278 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms