RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TMEM72A0PK05 275 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 CLDN24A6NM45 220 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 VWC2LB2RUY7 222 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 ATP6V1G2-DDX39BF2Z307 99 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 FAAHO00519 579 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 CPSF4O95639 269 aaKnown RBP13.01□□□□□ -0.33
PRKDC-204ENST00000521331 BPGMP07738 259 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 IMPDH2P12268 514 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 UQCRBP14927 111 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 HNF1AP20823 631 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 PAX7P23759 505 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 IGFBP5P24593 272 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 CHI3L1P36222 383 aaPredicted RBP13.01□□□□□ -0.33
PRKDC-204ENST00000521331 SLC1A3P43003 542 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 NR4A2P43354 598 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 SNRPD2P62316 118 aaKnown RBP13.01□□□□□ -0.33
PRKDC-204ENST00000521331 PLAURQ03405 335 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 GNA13Q14344 377 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 GGTLC2Q14390 218 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 MST1LQ2TV78 715 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 ANKRD46Q86W74 232 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 ARIH2OSQ8N7S6 290 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 POMGNT2Q8NAT1 580 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 CNOT9Q92600 299 aaKnown RBP13.01□□□□□ -0.33
PRKDC-204ENST00000521331 TESCQ96BS2 214 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 FBXO17Q96EF6 278 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 BOD1Q96IK1 185 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 TRNT1Q96Q11 434 aaKnown RBP13.01□□□□□ -0.33
PRKDC-204ENST00000521331 C19orf24Q9BVV8 132 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 SF3B5Q9BWJ5 86 aaKnown RBP13.01□□□□□ -0.33
PRKDC-204ENST00000521331 PIF1Q9H611 641 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 AKTIPQ9H8T0 292 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
PRKDC-204ENST00000521331 ANK2Q01484 3957 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 LOC100289279A0A1B0GTE1 492 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 AP3D1O14617 1153 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 LY6HO94772 140 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 C8BP07358 591 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 APEHP13798 732 aaKnown RBP13□□□□□ -0.33
PRKDC-204ENST00000521331 TACR3P29371 465 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 ANXA11P50995 505 aaKnown RBP13□□□□□ -0.33
PRKDC-204ENST00000521331 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
PRKDC-204ENST00000521331 TXNL4AP83876 142 aaKnown RBP13□□□□□ -0.33
PRKDC-204ENST00000521331 DPY19L1Q2PZI1 675 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 OTUD3Q5T2D3 398 aaPredicted RBP13□□□□□ -0.33
PRKDC-204ENST00000521331 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 KCNS3Q9BQ31 491 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 SLC35A5Q9BS91 424 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 MARCOQ9UEW3 520 aaPredicted RBP13□□□□□ -0.33
PRKDC-204ENST00000521331 PRDM4Q9UKN5 801 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 MOKQ9UQ07 419 aa13□□□□□ -0.33
PRKDC-204ENST00000521331 LOC390937A0A1W2PQ73 354 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 PRAMEF27A3QJZ7 478 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 CFAP73A6NFT4 308 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 AGAP5A6NIR3 686 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 HMGN4O00479 90 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 GPIP06744 558 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 CASP8Q14790 479 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 PDCD2Q16342 344 aaPredicted RBP12.99□□□□□ -0.33
PRKDC-204ENST00000521331 GSTA3Q16772 222 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 FAM120AOSQ5T036 256 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 LRRC74BQ6ZQY2 392 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 AAED1Q7RTV5 226 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 NUDCD3Q8IVD9 361 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF440Q8IYI8 595 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 TRIML2Q8N7C3 387 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF540Q8NDQ6 660 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 OR9K2Q8NGE7 335 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 MSI2Q96DH6 328 aaKnown RBP12.99□□□□□ -0.33
PRKDC-204ENST00000521331 PPP1R36Q96LQ0 422 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 SORCS2Q96PQ0 1159 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 SLC38A2Q96QD8 506 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 KATNB1Q9BVA0 655 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 PRR14Q9BWN1 585 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 CHODLQ9H9P2 273 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 MOV10Q9HCE1 1003 aaKnown RBP12.99□□□□□ -0.33
PRKDC-204ENST00000521331 TMEM45AQ9NWC5 275 aa12.99□□□□□ -0.33
PRKDC-204ENST00000521331 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
PRKDC-204ENST00000521331 ZC3H12DA2A288 527 aaKnown RBP12.98□□□□□ -0.33
PRKDC-204ENST00000521331 SLC35F4A4IF30 521 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 OR6C65A6NJZ3 312 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 LIPT2A6NK58 231 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 B9A039 149 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 HAX1O00165 279 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 KRT33AO76009 404 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 PDE5AO76074 875 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 MYZAPP0CAP1 466 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 IL7RP16871 459 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 CDH2P19022 906 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-204ENST00000521331 SERPINF1P36955 418 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 EPS8Q12929 822 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 SQLEQ14534 574 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 CARTPTQ16568 116 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 HIKESHIQ53FT3 197 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 SPANXN4Q5MJ08 99 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 SLC46A3Q7Z3Q1 461 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 RNF130Q86XS8 419 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 LRRC34Q8IZ02 419 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 ZIC4Q8N9L1 334 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms