RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CALHM3Q86XJ0 350 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 GABRG1Q8N1C3 465 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 LSMEM1Q8N8F7 131 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 OR52E4Q8NGH9 312 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 RP9Q8TA86 221 aaKnown RBP18.33■□□□□ 0.52
TRIM35-203ENST00000521253 PIGXQ8TBF5 258 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 ECSITQ9BQ95 431 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 TRIM2Q9C040 744 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 FANCFQ9NPI8 374 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 EMC3Q9P0I2 261 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 RPS6KB2Q9UBS0 482 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 ANKRD17O75179 2603 aaKnown RBP18.33■□□□□ 0.52
TRIM35-203ENST00000521253 ABCA4P78363 2273 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 A0A1B0GWA3 101 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 LIPT2A6NK58 231 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 NPIPB7O75200 414 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 GPIP06744 558 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 DRD4P21917 467 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 EDNRAP25101 427 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 OR3A2P47893 321 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 SLC16A1P53985 500 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 OR7A5Q15622 319 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 DUSP7Q16829 419 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 INTS11Q5TA45 600 aaKnown RBP18.32■□□□□ 0.52
TRIM35-203ENST00000521253 C1orf140Q5VVS0 124 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 C6orf89Q6UWU4 347 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.32■□□□□ 0.52
TRIM35-203ENST00000521253 PATL1Q86TB9 770 aaKnown RBP18.32■□□□□ 0.52
TRIM35-203ENST00000521253 CDH24Q86UP0 819 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 CXorf67Q86X51 503 aaPredicted RBP18.32■□□□□ 0.52
TRIM35-203ENST00000521253 TREML1Q86YW5 311 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 GPR32P1Q8NGA4 272 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 NRGNQ92686 78 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 TAMM41Q96BW9 452 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 NAA11Q9BSU3 229 aaPredicted RBP18.32■□□□□ 0.52
TRIM35-203ENST00000521253 TESQ9UGI8 421 aaKnown RBP18.32■□□□□ 0.52
TRIM35-203ENST00000521253 USP22Q9UPT9 525 aa18.32■□□□□ 0.52
TRIM35-203ENST00000521253 ELOA3DA6NLF2 546 aaPredicted RBP18.31■□□□□ 0.52
TRIM35-203ENST00000521253 TPST2O60704 377 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 GOSR1O95249 250 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 HRGP04196 525 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 COX4I1P13073 169 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 PSMB1P20618 241 aaKnown RBP18.31■□□□□ 0.52
TRIM35-203ENST00000521253 CRYBA2P53672 197 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 NCALDP61601 193 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 POU4F3Q15319 338 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 ELOA3BQ3SY89 546 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 FBXW10Q5XX13 1052 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 PAQR6Q6TCH4 344 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 CDC20BQ86Y33 519 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 ELOA3Q8NG57 546 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 STK35Q8TDR2 534 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 ZC3HAV1LQ96H79 300 aaKnown RBP18.31■□□□□ 0.52
TRIM35-203ENST00000521253 ZNF583Q96ND8 569 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 ARHGDIGQ99819 225 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 NSRP1Q9H0G5 558 aaKnown RBP18.31■□□□□ 0.52
TRIM35-203ENST00000521253 C12orf10Q9HB07 376 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 ZNF226Q9NYT6 803 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 PRSS50Q9UI38 385 aa18.31■□□□□ 0.52
TRIM35-203ENST00000521253 GMNCA6NCL1 334 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 M0R3H8 397 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 DYNC1I1O14576 645 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 SNX3O60493 162 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 AKR7A3O95154 331 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 LGI1O95970 557 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 GNGT1P63211 74 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 EGR4Q05215 589 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 OR1Q1Q15612 314 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 ALG10BQ5I7T1 473 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 OTUD3Q5T2D3 398 aaPredicted RBP18.3■□□□□ 0.52
TRIM35-203ENST00000521253 CCDC80Q76M96 950 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 CPLX4Q7Z7G2 160 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 TMEM99Q8N816 258 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 DNAJA4Q8WW22 397 aaPredicted RBP18.3■□□□□ 0.52
TRIM35-203ENST00000521253 TAPBPLQ9BX59 468 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 ACTR6Q9GZN1 396 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 EVA1AQ9H8M9 152 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 TMEM27Q9HBJ8 222 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 ADPRHL2Q9NX46 363 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 C6orf203Q9P0P8 240 aaPredicted RBP18.3■□□□□ 0.52
TRIM35-203ENST00000521253 GPR52Q9Y2T5 361 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 NOSIPQ9Y314 301 aaKnown RBP18.3■□□□□ 0.52
TRIM35-203ENST00000521253 AKAP6Q13023 2319 aa18.3■□□□□ 0.52
TRIM35-203ENST00000521253 A0A0B4J2E0 115 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 A0A1B0GX12 115 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 GPR171O14626 319 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 AIM2O14862 343 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 SIAH2O43255 324 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 AHSA1O95433 338 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 ADAP00813 363 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 THBDP07204 575 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 C8BP07358 591 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 PPP3CBP16298 524 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 CD247P20963 164 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 CRYGSP22914 178 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 NTF4P34130 210 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 SLC17A1Q14916 467 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 TSC22D1Q15714 1073 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 NRF1Q16656 503 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 FAM91A1Q658Y4 838 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms