RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CEBPDP49716 269 aaPredicted RBP5.87□□□□□ -1.47
LSM1-202ENST00000520286 COX10Q12887 443 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 ELAVL3Q14576 367 aaKnown RBP5.87□□□□□ -1.47
LSM1-202ENST00000520286 GANABQ14697 944 aaKnown RBP5.87□□□□□ -1.47
LSM1-202ENST00000520286 SNAI3Q3KNW1 292 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 NHLRC3Q5JS37 347 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 OR4D5Q8NGN0 318 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 FAM81AQ8TBF8 368 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.87□□□□□ -1.47
LSM1-202ENST00000520286 COQ2Q96H96 371 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 HCAR1Q9BXC0 346 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 NXF5Q9H1B4 397 aaKnown RBP5.87□□□□□ -1.47
LSM1-202ENST00000520286 CENPHQ9H3R5 247 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 SUDS3Q9H7L9 328 aaPredicted RBP5.87□□□□□ -1.47
LSM1-202ENST00000520286 TMBIM4Q9HC24 238 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 TIGARQ9NQ88 270 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 EHFQ9NZC4 300 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 AIPL1Q9NZN9 384 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 ZNF221Q9UK13 617 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 FRMPD4Q14CM0 1322 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 RIC1Q4ADV7 1423 aa5.87□□□□□ -1.47
LSM1-202ENST00000520286 CACNA1SQ13698 1873 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 LAMB4A4D0S4 1761 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 RTL9Q8NET4 1388 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 GMNCA6NCL1 334 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 PCP4L1A6NKN8 68 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 SHISA9B4DS77 424 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 MSH4O15457 936 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 SCGNO76038 276 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 CA1P00915 261 aaPredicted RBP5.86□□□□□ -1.47
LSM1-202ENST00000520286 RPSAP08865 295 aaKnown RBP5.86□□□□□ -1.47
LSM1-202ENST00000520286 H2BFMP0C1H6 154 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 UMPSP11172 480 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 DBTP11182 482 aaKnown RBP5.86□□□□□ -1.47
LSM1-202ENST00000520286 IDSP22304 550 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 CASP14P31944 242 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 HSPA9P38646 679 aaKnown RBP5.86□□□□□ -1.47
LSM1-202ENST00000520286 PEX19P40855 299 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 MS4A2Q01362 244 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 C2orf54Q08AI8 447 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 RIPPLY1Q0D2K3 151 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 ZNF154Q13106 437 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 PPP1R3AQ16821 1122 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 SLC5A12Q1EHB4 618 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 FAM120AOSQ5T036 256 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 BEND3Q5T5X7 828 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 AGBL2Q5U5Z8 902 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 ZNF57Q68EA5 555 aaPredicted RBP5.86□□□□□ -1.47
LSM1-202ENST00000520286 ZNF343Q6P1L6 599 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 GCNT7Q6ZNI0 430 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 CCDC80Q76M96 950 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 MOB3BQ86TA1 216 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 OR10A7Q8NGE5 316 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 OR5D13Q8NGL4 314 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 OR1F12Q8NHA8 337 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 ITLN1Q8WWA0 313 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 IL1F10Q8WWZ1 152 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 FBXO32Q969P5 355 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 ZBP1Q9H171 429 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 FN3KRPQ9HA64 309 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
LSM1-202ENST00000520286 SMOXQ9NWM0 555 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 CDH9Q9ULB4 789 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 OARD1Q9Y530 152 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 STYXL1Q9Y6J8 313 aa5.86□□□□□ -1.47
LSM1-202ENST00000520286 TRPM7Q96QT4 1865 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 WDR19Q8NEZ3 1342 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 SYNRGQ9UMZ2 1314 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 SAGE2PA6NJ88 616 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 CCT8L1PA6NM43 557 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 G3V4G9 280 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 SRPX2O60687 465 aaPredicted RBP5.85□□□□□ -1.47
LSM1-202ENST00000520286 RND3P61587 244 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 ITIH4Q14624 930 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 SLC10A1Q14973 349 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 KCTD21Q4G0X4 260 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 TEX44Q53QW1 395 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 OTUD3Q5T2D3 398 aaPredicted RBP5.85□□□□□ -1.47
LSM1-202ENST00000520286 HHATQ5VTY9 493 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 PVRIGQ6DKI7 326 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 FAHD2BQ6P2I3 314 aaPredicted RBP5.85□□□□□ -1.47
LSM1-202ENST00000520286 PAQR6Q6TCH4 344 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 ZNF497Q6ZNH5 498 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 CDH26Q8IXH8 852 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 LRRC75A-AS1Q8N1F1 130 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 OR2T33Q8NG76 320 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 OR5L2Q8NGL0 311 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 OR6T1Q8NGN1 323 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 AGAP11Q8TF27 550 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 RNF139Q8WU17 664 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 FAHD2AQ96GK7 314 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 C8orf76Q96K31 380 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 TSC22D3Q99576 134 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 VGLL1Q99990 258 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 TM2D1Q9BX74 207 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 TSGA10Q9BZW7 698 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 YIPF3Q9GZM5 350 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 ARMCX1Q9P291 453 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 SNX12Q9UMY4 172 aa5.85□□□□□ -1.47
LSM1-202ENST00000520286 A0A0J9YWU9 116 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms