RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	MAPKAP1	Q9BPZ7	522 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	CSTL1	Q9H114	145 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZBTB20	Q9HC78	741 aa	Predicted RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PRTFDC1	Q9NRG1	225 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PNO1	Q9NRX1	252 aa	Known RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	FARSB	Q9NSD9	589 aa	Known RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	NMRK1	Q9NWW6	199 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	MS4A12	Q9NXJ0	267 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	AHSP	Q9NZD4	102 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	TEKT2	Q9UIF3	430 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PHF11	Q9UIL8	331 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF225	Q9UK10	706 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF580	Q9UK33	172 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	FBXW2	Q9UKT8	454 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PLLP	Q9Y342	182 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	FASN	P49327	2511 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	IGHV4OR15-8	A0A075B7B6	117 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228		A0A0A6YYD5	115 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	PLSCR5	A0PG75	271 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SYNDIG1L	A6NDD5	238 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228		A8MUA0	341 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228		H3BQF6	201 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	UBFD1	O14562	309 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	AHCYL1	O43865	530 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	LDB3	O75112	727 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SPAG7	O75391	227 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	CRCP	O75575	148 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	MYO1D	O94832	1006 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	PGM3	O95394	542 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	PDYN	P01213	254 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	GBA	P04062	536 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	IFNA16	P05015	189 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	KLK1	P06870	262 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SNRNP70	P08621	437 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	FAM58BP	P0C7Q3	252 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SELL	P14151	372 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	ITGA2	P17301	1181 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	HMOX2	P30519	316 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	MFAP4	P55083	255 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLC26A5	P58743	744 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	ASPH	Q12797	758 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	STX4	Q12846	297 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SERTAD2	Q14140	314 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	IZUMO4	Q1ZYL8	232 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	CEP85L	Q5SZL2	805 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	CCNYL2	Q5T2Q4	361 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	IGFL2	Q6UWQ7	119 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	TUBA1A	Q71U36	451 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228		Q75L30	129 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	PAGE2	Q7Z2X7	111 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	CROCCP2	Q86T23	111 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	NUDT13	Q86X67	352 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	EPHX4	Q8IUS5	362 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	C10orf107	Q8IVU9	208 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	MCEMP1	Q8IX19	187 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	IQCK	Q8N0W5	287 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	GBP7	Q8N8V2	638 aa	Predicted RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	PNPLA2	Q96AD5	504 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	FAM111A	Q96PZ2	611 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	TUBA1C	Q9BQE3	449 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF717	Q9BY31	904 aa	Predicted RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	MRPL1	Q9BYD6	325 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	ILKAP	Q9H0C8	392 aa	Predicted RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	CENPH	Q9H3R5	247 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	RPF2	Q9H7B2	306 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	KCNK13	Q9HB14	408 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	MID1IP1	Q9NPA3	183 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	LYAR	Q9NX58	379 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	STMN3	Q9NZ72	180 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SENP1	Q9P0U3	644 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	VPS29	Q9UBQ0	182 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	ATG4B	Q9Y4P1	393 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	ASB4	Q9Y574	426 aa		6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	HELZ2	Q9BYK8	2649 aa	Known RBP	6.24	□□□□□ -1.41
SDCBP-208	ENST00000520228	SAGE2P	A6NJ88	616 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	GLOD5	A6NK44	160 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228		J3QKU1	62 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	TNNI3	P19429	210 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	PPP2R1B	P30154	601 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	GCH1	P30793	250 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ALDH3A1	P30838	453 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLC15A1	P46059	708 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	MAPK12	P53778	367 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	MLLT10	P55197	1068 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ARG2	P78540	354 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	TNFRSF17	Q02223	184 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF33B	Q06732	778 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	PCLAF	Q15004	111 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	TCHHL1	Q5QJ38	904 aa	Predicted RBP	6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	ACER2	Q5QJU3	275 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	H3F3C	Q6NXT2	135 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	SPSB3	Q6PJ21	355 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	SCIMP	Q6UWF3	145 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	UNQ6126/PRO20091	Q6UXV3	157 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228		Q6ZS92	163 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	COMMD6	Q7Z4G1	85 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	CCDC190	Q86UF4	302 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	OR4N5	Q8IXE1	308 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	METTL4	Q8N3J2	472 aa		6.23	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLC5A8	Q8N695	610 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms