RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 DDX31Q9H8H2 851 aaKnown RBP6.58□□□□□ -1.36
CLK4-202ENST00000519132 SPAG4Q9NPE6 437 aa6.58□□□□□ -1.36
CLK4-202ENST00000519132 GRIP1Q9Y3R0 1128 aa6.58□□□□□ -1.36
CLK4-202ENST00000519132 WNT6Q9Y6F9 365 aa6.58□□□□□ -1.36
CLK4-202ENST00000519132 SHROOM3Q8TF72 1996 aa6.58□□□□□ -1.36
CLK4-202ENST00000519132 PDE4DIPQ5VU43 2346 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 SDR42E2A6NKP2 422 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 LEUTXA8MZ59 168 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 MBL2P11226 248 aaPredicted RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 PAICSP22234 425 aaKnown RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 KPNA2P52292 529 aaKnown RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 SIM1P81133 766 aaPredicted RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 FUT7Q11130 342 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 SLC10A2Q12908 348 aaPredicted RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 NADSYN1Q6IA69 706 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 SYCE2Q6PIF2 218 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 CATSPERDQ86XM0 798 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 UMODL1-AS1Q8N2C9 162 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 VN1R2Q8NFZ6 395 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 EXTL1Q92935 676 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 NXPE2Q96DL1 559 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 SLC22A12Q96S37 553 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 PPANQ9NQ55 473 aaKnown RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 IMPAD1Q9NX62 359 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 ANKRD10Q9NXR5 420 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 MIOXQ9UGB7 285 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 MYO7AQ13402 2215 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 A0A0G2JMP0 313 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 MFSD11O43934 449 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 CTNSO60931 367 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 MOCS2O96007 188 aaPredicted RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 NQO2P16083 231 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 GRIA3P42263 894 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 GRIK2Q13002 908 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 OGFOD2Q6N063 350 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 FBXL22Q6P050 247 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 PLEKHG7Q6ZR37 379 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 RBM23Q86U06 439 aaKnown RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 GPR180Q86V85 440 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 TMEM126BQ8IUX1 230 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 CMTM8Q8IZV2 173 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 OR9A2Q8NGT5 310 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 HAS2Q92819 552 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 QKIQ96PU8 341 aaKnown RBP eCLIP6.57□□□□□ -1.36
CLK4-202ENST00000519132 BTBD9Q96Q07 612 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 CITED1Q99966 193 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 IL1RAPQ9NPH3 570 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 TEX10Q9NXF1 929 aaPredicted RBP6.57□□□□□ -1.36
CLK4-202ENST00000519132 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 UGT2A1Q9Y4X1 527 aa6.57□□□□□ -1.36
CLK4-202ENST00000519132 A0A0X1KG70 313 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 METTL21EPA6NDL7 271 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 F5H5T6 163 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 ZNF10P21506 573 aaPredicted RBP6.56□□□□□ -1.36
CLK4-202ENST00000519132 DTYMKP23919 212 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 DGCR2P98153 550 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 ZXDBP98169 803 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 HYAL1Q12794 435 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 SELPLGQ14242 412 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 SLC25A25Q6KCM7 469 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 RPL13AP3Q6NVV1 102 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 SYVN1Q86TM6 617 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 VRK3Q8IV63 474 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 LAX1Q8IWV1 398 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 AMER3Q8N944 861 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 NEXN-AS1Q8NBZ9 246 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 OR10A7Q8NGE5 316 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 OR5R1Q8NH85 324 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 FBXO17Q96EF6 278 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 DAZAP1Q96EP5 407 aaKnown RBP6.56□□□□□ -1.36
CLK4-202ENST00000519132 LRR1Q96L50 414 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 ATG101Q9BSB4 218 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
CLK4-202ENST00000519132 CALHM2Q9HA72 323 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 NOX4Q9NPH5 578 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 GKN1Q9NS71 199 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 TREX1Q9NSU2 369 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 HIF1ANQ9NWT6 349 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 MS4A12Q9NXJ0 267 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 PISDQ9UG56 409 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 SERGEFQ9UGK8 458 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 ST6GALNAC2Q9UJ37 374 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 LSM7Q9UK45 103 aaKnown RBP6.56□□□□□ -1.36
CLK4-202ENST00000519132 NDRG2Q9UN36 371 aaKnown RBP6.56□□□□□ -1.36
CLK4-202ENST00000519132 LRRN3E7EW58 273 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 IVDP26440 423 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 PIK3R1P27986 724 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 PPP2R1BP30154 601 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 CSKP41240 450 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 CEBPGP53567 150 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 SIGLEC14Q08ET2 396 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 FOXI1Q12951 378 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 PAN3Q58A45 887 aaKnown RBP6.56□□□□□ -1.36
CLK4-202ENST00000519132 RABGAP1LQ5R372 815 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 ZNF470Q6ECI4 717 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 LCN10Q6JVE6 187 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 UGT3A1Q6NUS8 523 aa6.56□□□□□ -1.36
CLK4-202ENST00000519132 CCNI2Q6ZMN8 369 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms