RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RBM34P42696 430 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CDKN2CP42773 168 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 XCR1P46094 333 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 KPNA2P52292 529 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 RIPK4P57078 832 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 RPL24P83731 157 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PITPNAQ00169 270 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 RIPPLY1Q0D2K3 151 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 SCRN3Q0VDG4 424 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 RAB40BQ12829 278 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 FOXE3Q13461 319 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 SERTAD2Q14140 314 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CASP8Q14790 479 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PTGR1Q14914 329 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 KIR2DS3Q14952 304 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 GABRA6Q16445 453 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 DUSP7Q16829 419 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CLVS2Q5SYC1 327 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR8G2PQ6IF36 304 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 FAHD2BQ6P2I3 314 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CLEC18BQ6UXF7 455 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 Q6ZSR3 168 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PIGZQ86VD9 579 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 APOBEC3FQ8IUX4 373 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 VRK3Q8IV63 474 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR4N5Q8IXE1 308 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 IQCKQ8N0W5 287 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CDRT4Q8N9R6 151 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF383Q8NA42 475 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 CLEC18CQ8NCF0 446 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR6N2Q8NGY6 317 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR2L8Q8NGY9 312 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 LGALS14Q8TCE9 139 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 FAF2Q96CS3 445 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 DNAJA3Q96EY1 480 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 FAHD2AQ96GK7 314 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZFP3Q96NJ6 502 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 RNF2Q99496 336 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ECSITQ9BQ95 431 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PSD2Q9BQI7 771 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 DGCR6LQ9BY27 220 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZYG11BQ9C0D3 744 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 SYT4Q9H2B2 425 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 KLK15Q9H2R5 256 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TUBB1Q9H4B7 451 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 Q9HAA7 133 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 FGF20Q9NP95 211 aaPredicted RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZFP64Q9NPA5 681 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 AGPAT4Q9NRZ5 378 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TREX1Q9NSU2 369 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TAS2R16Q9NYV7 291 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ASIC3Q9UHC3 531 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNHIT2Q9UHR6 403 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 TCF19Q9Y242 345 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 YARS2Q9Y2Z4 477 aaKnown RBP3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 HYOU1Q9Y4L1 999 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 PTGDR2Q9Y5Y4 395 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 V9GYY9 64 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 ADGRA3Q8IWK6 1321 aa3.41□□□□□ -1.86
RNU4-60P-201ENST00000517239 METP08581 1390 aa3.4□□□□□ -1.86
RNU4-60P-201ENST00000517239 PLEKHH1Q9ULM0 1364 aa3.4□□□□□ -1.86
RNU4-60P-201ENST00000517239 POLR2AP24928 1970 aaKnown RBP3.4□□□□□ -1.86
RNU4-60P-201ENST00000517239 IGHV2-70DA0A0C4DH43 119 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPS10-NUDT3A0A1W2PQS6 291 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 A0A1W2PRF3 423 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 A0A1W2PRM7 423 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ERI2A8K979 691 aaKnown RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 E7ESA3 106 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 SLC1A7O00341 560 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOSR2O14653 212 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ADAM10O14672 748 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ATP6V0E1O15342 81 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 EMC8O43402 210 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 SPRY3O43610 288 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 SYNGR3O43761 229 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 EIF4E2O60573 245 aaKnown RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 CTSVO60911 334 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 CNOT3O75175 753 aaKnown RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 ADAP1O75689 374 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR7A10O76100 309 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 C1orf105O95561 183 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 GCP02774 474 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 KRT7P08729 469 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 PET100P0DJ07 73 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 RNH1P13489 461 aaKnown RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 HLA-DOBP13765 273 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPL35AP18077 110 aaKnown RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 HOXD3P31249 432 aaPredicted RBP3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 EPHX2P34913 555 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OPRD1P41143 372 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 NBL1P41271 181 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 MAP3K8P41279 467 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR3A2P47893 321 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 CCR8P51685 355 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 CRISP1P54107 249 aa3.4□□□□□ -1.87
RNU4-60P-201ENST00000517239 GPX6P59796 221 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms