RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 HOXC5Q00444 222 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 EGR4Q05215 589 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ADIPOQQ15848 244 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PDCD2Q16342 344 aaPredicted RBP7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 LSM12Q3MHD2 195 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PHYHD1Q5SRE7 291 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CYB5R2Q6BCY4 276 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TMEM108Q6UXF1 575 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 GRINAQ7Z429 371 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 VRK2Q86Y07 508 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 OR4A15Q8NGL6 344 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PNPT1Q8TCS8 783 aaKnown RBP7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TMEM158Q8WZ71 300 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 FAM168AQ92567 244 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 VPS33AQ96AX1 596 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 BOD1Q96IK1 185 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 SLC35G5Q96KT7 338 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PTDSS2Q9BVG9 487 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 NGBQ9NPG2 151 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ASB6Q9NWX5 421 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TMEM160Q9NX00 188 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TMEM181Q9P2C4 612 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 B3GAT1Q9P2W7 334 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TRAPPC4Q9Y296 219 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 WDR45Q9Y484 360 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ATP23Q9Y6H3 246 aa7.19□□□□□ -1.26
SCARNA20.3-201ENST00000516913 A0A096LPE4 126 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 A0A1W2PPZ6 126 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 FTCDNL1E5RQL4 147 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 SDHDO14521 159 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 FRS3O43559 492 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 MRPL33O75394 65 aaKnown RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ZNF432O94892 652 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 NUDT7P0C024 238 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 NUDT17P0C025 328 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CDH2P19022 906 aaPredicted RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 UQCRC2P22695 453 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 APOBEC3AP31941 199 aaPredicted RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 RBMXP38159 391 aaKnown RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 LSM11P83369 360 aaKnown RBP eCLIP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 EPS8Q12929 822 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CEACAM7Q14002 265 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 GGTLC2Q14390 218 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 RAB35Q15286 201 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TRIP10Q15642 601 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TBRG1Q3YBR2 411 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ZNF544Q6NX49 715 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ANKRD16Q6P6B7 361 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CLEC2AQ6UVW9 174 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CASP12Q6UXS9 341 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ZNF836Q6ZNA1 936 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 MAVSQ7Z434 540 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 FBXL14Q8N1E6 418 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 OR9K2Q8NGE7 335 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 AENQ8WTP8 325 aaKnown RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TMEM45BQ96B21 275 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 C3orf49Q96BT1 292 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 AURKBQ96GD4 344 aaPredicted RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ZNF75AQ96N20 296 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CCDC115Q96NT0 180 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 BEX2Q9BXY8 128 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 ALG2Q9H553 416 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CHODLQ9H9P2 273 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 BARX1Q9HBU1 254 aaPredicted RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 FANCFQ9NPI8 374 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 EXOSC3Q9NQT5 275 aaKnown RBP7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 HDGFL3Q9Y3E1 203 aa7.18□□□□□ -1.26
SCARNA20.3-201ENST00000516913 IGKV1D-42A0A075B6H8 117 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 AQP7P3A6NL99 342 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CHEK2O96017 543 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 HPRP00739 348 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 IGLV1-44P01699 117 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CECR9P0C854 216 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 SLC25A16P16260 332 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 HOXB9P17482 250 aaPredicted RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 BGNP21810 368 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 MAPK1P28482 360 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 MPGP29372 298 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 THBS4P35443 961 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 SLC1A3P43003 542 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CSNK2A1P68400 391 aaPredicted RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 OR7A5Q15622 319 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CHI3L2Q15782 390 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 NRF1Q16656 503 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 FAM174BQ3ZCQ3 159 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TNFAIP8L3Q5GJ75 292 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 RPS26P11Q5JNZ5 115 aaPredicted RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 MRPL2Q5T653 305 aaKnown RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PAQR6Q6TCH4 344 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 C1orf229Q6ZS94 237 aaPredicted RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 CREB3L2Q70SY1 520 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 C16orf62Q7Z3J2 963 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 EIF1ADQ8N9N8 165 aaKnown RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 OR1K1Q8NGR3 316 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PIGXQ8TBF5 258 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 PROX1Q92786 737 aa7.17□□□□□ -1.26
SCARNA20.3-201ENST00000516913 TESCQ96BS2 214 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms