RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	TMEM45B	Q96B21	275 aa		10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	DNAJA3	Q96EY1	480 aa		10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	NAA11	Q9BSU3	229 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	SDR39U1	Q9NRG7	319 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	PARPBP	Q9NWS1	579 aa		10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	THUMPD1	Q9NXG2	353 aa	Known RBP	10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	ZIM2	Q9NZV7	527 aa		10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	JMJD1C	Q15652	2540 aa		10.85	□□□□□ -0.67
CDK18-223	ENST00000515514	ZC3H12D	A2A288	527 aa	Known RBP	10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	RNF223	E7ERA6	249 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	SLC22A3	O75751	556 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	CD8A	P01732	235 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	BCHE	P06276	602 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	GPI	P06744	558 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	CD40	P25942	277 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	NTF4	P34130	210 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	ACVR1B	P36896	505 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	TGFBR3	Q03167	851 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	SPOCK1	Q08629	439 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	MAPK11	Q15759	364 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	GABRA6	Q16445	453 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	ZSWIM7	Q19AV6	140 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	NXN	Q6DKJ4	435 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	SLC22A25	Q6T423	547 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	ZNF836	Q6ZNA1	936 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	OR52E4	Q8NGH9	312 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	OR52P1P	Q8NH57	321 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	MGARP	Q8TDB4	240 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	MUS81	Q96NY9	551 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	SF3B5	Q9BWJ5	86 aa	Known RBP	10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	REG4	Q9BYZ8	158 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	ADAM19	Q9H013	955 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	PIF1	Q9H611	641 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	RMND5A	Q9H871	391 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	CACYBP	Q9HB71	228 aa	Known RBP	10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	SLC6A13	Q9NSD5	602 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	NKIRAS1	Q9NYS0	192 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	AMDHD2	Q9Y303	409 aa		10.84	□□□□□ -0.67
CDK18-223	ENST00000515514	CAD	P27708	2225 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514		A0A096LPI6	279 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	LIPT2	A6NK58	231 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	AQP7P3	A6NL99	342 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	KLF11	O14901	512 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	FRS3	O43559	492 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	ANP32D	O95626	131 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	KIT	P10721	976 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	ETFA	P13804	333 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	CRAT	P43155	626 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	ZNF83	P51522	516 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	DSTN	P60981	165 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	LARS2	Q15031	903 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	WBP2NL	Q6ICG8	309 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	C11orf71	Q6IPW1	123 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	ZNF544	Q6NX49	715 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	MAVS	Q7Z434	540 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	VRK2	Q86Y07	508 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	POMGNT2	Q8NAT1	580 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	OR9K2	Q8NGE7	335 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	ITCH	Q96J02	903 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	ADAD1	Q96M93	576 aa	Known RBP	10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	DHRS9	Q9BPW9	319 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	TPT1P8	Q9HAU6	139 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	SLC17A5	Q9NRA2	495 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	SLC7A10	Q9NS82	523 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	CBLN4	Q9NTU7	201 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	RLIM	Q9NVW2	624 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	UPB1	Q9UBR1	384 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	POU2F3	Q9UKI9	436 aa		10.83	□□□□□ -0.68
CDK18-223	ENST00000515514	TMEM247	A6NEH6	219 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514		M0R1B8	84 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	NDUFS7	O75251	213 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	CRLF1	O75462	422 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	TP53	P04637	393 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	TFPT	P0C1Z6	253 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	CXCR1	P25024	350 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	MPG	P29372	298 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	TTK	P33981	857 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	ACAA2	P42765	397 aa	Known RBP	10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	FOXG1	P55316	489 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	COPZ1	P61923	177 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	CEACAM7	Q14002	265 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	OR7A5	Q15622	319 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	SLC9B1	Q4ZJI4	515 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	C6orf10	Q5SRN2	563 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	TSPO2	Q5TGU0	170 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	PRAMEF8	Q5VWM4	474 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	PRAMEF7	Q5VXH5	474 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	KLHL24	Q6TFL4	600 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	B3GLCT	Q6Y288	498 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	FBXL14	Q8N1E6	418 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	DEPDC4	Q8N2C3	294 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	MIER2	Q8N344	545 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	MUC15	Q8N387	334 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	SLC38A5	Q8WUX1	472 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	SLC35B4	Q969S0	331 aa		10.82	□□□□□ -0.68
CDK18-223	ENST00000515514	ZBTB9	Q96C00	473 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms