RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GABARAPL1Q9H0R8 117 aa10.77□□□□□ -0.69
PDLIM5-220ENST00000514830 COQ10BQ9H8M1 238 aa10.77□□□□□ -0.69
PDLIM5-220ENST00000514830 KRCC1Q9NPI7 259 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-220ENST00000514830 ZNF835Q9Y2P0 537 aa10.77□□□□□ -0.69
PDLIM5-220ENST00000514830 ZGRF1Q86YA3 2104 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 A0A0J9YW62 118 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ZC3H12DA2A288 527 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 LIPT2A6NK58 231 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 TTLL8A6PVC2 850 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 CASQ2O14958 399 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 KLF4O43474 513 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 WISP2O76076 250 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 CCNB2O95067 398 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 AHSA1O95433 338 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 BGLAPP02818 100 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 HOXD4P09016 255 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 TSPAN19P0C672 248 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 IDUAP35475 653 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 OMPP47874 163 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ARHGDIAP52565 204 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 AGFG1P52594 562 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 RAC3P60763 192 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 CSNK2A1P68400 391 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 MYBPHQ13203 477 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 RCN1Q15293 331 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 SF3B4Q15427 424 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ZNF74Q16587 644 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 TMEM176BQ3YBM2 270 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 CD300LDQ6UXZ3 194 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 Q6ZPB1 254 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 TMPPEQ6ZT21 453 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 RRM2BQ7LG56 351 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 FGD2Q7Z6J4 655 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ADGRE4PQ86SQ3 457 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 NRMQ8IXM6 262 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 MEIOBQ8N635 442 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 SCAIQ8N9R8 606 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ST6GALNAC3Q8NDV1 305 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ADPRHL1Q8NDY3 354 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 OR52J3Q8NH60 311 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 OR2V1Q8NHB1 315 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 PIGXQ8TBF5 258 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ZPLD1Q8TCW7 415 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 GIPC3Q8TF64 312 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 DNAJC9Q8WXX5 260 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 BPIFA2Q96DR5 249 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 KTI12Q96EK9 354 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 ARL5BQ96KC2 179 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 DGCR6LQ9BY27 220 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 OR11A1Q9GZK7 315 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 TSPAN10Q9H1Z9 355 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 EXO5Q9H790 373 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 FKRPQ9H9S5 495 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 RNPEPL1Q9HAU8 725 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 FANCFQ9NPI8 374 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 MGAT4BQ9UQ53 548 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 CORINQ9Y5Q5 1042 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 SPENQ96T58 3664 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 PTPN13Q12923 2485 aa10.76□□□□□ -0.69
PDLIM5-220ENST00000514830 PHF3Q92576 2039 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 A0A1B0GTH9 108 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 AHRRA9YTQ3 701 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 G3V2T6 193 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 EIF1BO60739 113 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 E2F6O75461 281 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 ADAP00813 363 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 IMPDH2P12268 514 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 ANXA8P13928 327 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 CBLP22681 906 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 TCEA1P23193 301 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 FPR3P25089 353 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 SHC1P29353 583 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 PTGS2P35354 604 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 PTGER4P35408 488 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 GSSP48637 474 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 SLC9A3P48764 834 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 STARP49675 285 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 DIO1P49895 249 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 SUCLG1P53597 346 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 IST1P53990 364 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 CLDN20P56880 219 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 RPS3AP61247 264 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 SLC35A1P78382 337 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 H3F3AP84243 136 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 PRR30Q53SZ7 412 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 PGBD2Q6P3X8 592 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 FAHD1Q6P587 224 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 POMZP3Q6PJE2 187 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 TBPL2Q6SJ96 375 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 SLC46A3Q7Z3Q1 461 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 ZER1Q7Z7L7 766 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 AMIGO2Q86SJ2 522 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 ZDHHC13Q8IUH4 622 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 CDK20Q8IZL9 346 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 RNF217Q8TC41 542 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 CPT1CQ8TCG5 803 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 TAAR8Q969N4 342 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 TIGARQ9NQ88 270 aa10.75□□□□□ -0.69
PDLIM5-220ENST00000514830 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms