RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IDUAP35475 653 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 IDH3AP50213 366 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC17A1Q14916 467 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 LARS2Q15031 903 aaKnown RBP9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 WBP2NLQ6ICG8 309 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 BLOC1S3Q6QNY0 202 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 CASP12Q6UXS9 341 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 P2RY8Q86VZ1 359 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 FUNDC1Q8IVP5 155 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 CIARTQ8N365 385 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 CLIP4Q8N3C7 705 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 GOLGA6L1Q8N7Z2 621 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 KBTBD8Q8NFY9 601 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 BBS10Q8TAM1 723 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 NEUROG1Q92886 237 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM45BQ96B21 275 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 C3orf49Q96BT1 292 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 TRIM2Q9C040 744 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 AMBRA1Q9C0C7 1298 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 BCL2L10Q9HD36 194 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC52A3Q9NQ40 469 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 ASB6Q9NWX5 421 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 TAS2R16Q9NYV7 291 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC25A37Q9NYZ2 338 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 IFT52Q9Y366 437 aa9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 NUP214P35658 2090 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-205ENST00000514469 TRBV5-3A0A0A0MS03 114 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 TRIM64A6NGJ6 449 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 TRIM64BA6NI03 449 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 AQP7P3A6NL99 342 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 FAM171A2A8MVW0 826 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 SHISA9B4DS77 424 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 H7C1Q1 480 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 OVOL3O00110 214 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 CLIC1O00299 241 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 FRS3O43559 492 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 NPIPB7O75200 414 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 MRPL33O75394 65 aaKnown RBP9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 RAD51DO75771 328 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 GPIP06744 558 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 HEXAP06865 529 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 SOD3P08294 240 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 ITGA5P08648 1049 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 PRG2P13727 222 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 CXCR1P25024 350 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 ATP4BP51164 291 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 AQP5P55064 265 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 COPZ1P61923 177 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 RPS4XP62701 263 aaKnown RBP9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 IRX1P78414 480 aaPredicted RBP9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 CLEC9AQ6UXN8 241 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 SERPINA11Q86U17 422 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 UBE2J2Q8N2K1 259 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 CADM2Q8N3J6 435 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 STON2Q8WXE9 905 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 MAL2Q969L2 176 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC35B4Q969S0 331 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 MUCL1Q96DR8 90 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 SPDL1Q96EA4 605 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 BDH2Q9BUT1 245 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 ARMC7Q9H6L4 198 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 CACYBPQ9HB71 228 aaKnown RBP9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 TMEM45AQ9NWC5 275 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 DCTN4Q9UJW0 460 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 LAMP3Q9UQV4 416 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 MAGED1Q9Y5V3 778 aaPredicted RBP9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC25A15Q9Y619 301 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 GMEB1Q9Y692 573 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 ACANP16112 2415 aa9.21□□□□□ -0.94
HMGXB3-205ENST00000514469 A8MVM7 634 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 NR5A2O00482 541 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 FZD7O75084 574 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 ARAFP10398 606 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 ETS2P15036 469 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 NCF2P19878 526 aaPredicted RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 PPIBP23284 216 aaKnown RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 P2RY4P51582 365 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 CDH11P55287 796 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 FOXG1P55316 489 aaPredicted RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 FAPQ12884 760 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 BNIP2Q12982 314 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 CEACAM7Q14002 265 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 OR7A5Q15622 319 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 GABRA6Q16445 453 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 PGGHGQ32M88 737 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF311Q5JNZ3 666 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 PAGE3Q5JUK9 113 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 OTUD3Q5T2D3 398 aaPredicted RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 OR7E24Q6IFN5 339 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 C10orf111Q8N326 155 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 TMEM99Q8N816 258 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 ZIC4Q8N9L1 334 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 C1orf162Q8NEQ5 155 aaPredicted RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 OR9K2Q8NGE7 335 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 OR52E4Q8NGH9 312 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 SMAP2Q8WU79 429 aaPredicted RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 SF3B5Q9BWJ5 86 aaKnown RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 RSPO3Q9BXY4 272 aaPredicted RBP9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 PIF1Q9H611 641 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms