RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ZNF621Q6ZSS3 439 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 FBXL14Q8N1E6 418 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 MUC15Q8N387 334 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 SPATA3Q8NHX4 192 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 OR52E6Q96RD3 313 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 ADAM19Q9H013 955 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 MTHFD2LQ9H903 347 aaPredicted RBP10.71□□□□□ -0.69
SNHG4-208ENST00000514110 KCNK9Q9NPC2 374 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 SLC6A13Q9NSD5 602 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 AIG1Q9NVV5 245 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 UPB1Q9UBR1 384 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 SLC9A8Q9Y2E8 581 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.69
SNHG4-208ENST00000514110 CFAP73A6NFT4 308 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 PGRP06401 933 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 GKN3PP0CG01 181 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 NR2F1P10589 423 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 IL7RP16871 459 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 HMBOX1Q6NT76 420 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 PAQR6Q6TCH4 344 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 HIPK1Q86Z02 1210 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 KIRREL3Q8IZU9 778 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 TRIML2Q8N7C3 387 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 ZIC4Q8N9L1 334 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 PMM1Q92871 262 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 NAA11Q9BSU3 229 aaPredicted RBP10.7□□□□□ -0.7
SNHG4-208ENST00000514110 CENPHQ9H3R5 247 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 WDR55Q9H6Y2 383 aaPredicted RBP10.7□□□□□ -0.7
SNHG4-208ENST00000514110 SLC17A5Q9NRA2 495 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 RLIMQ9NVW2 624 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 PARPBPQ9NWS1 579 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
SNHG4-208ENST00000514110 ABCA1O95477 2261 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 LIPT2A6NK58 231 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 A8MV72 311 aaPredicted RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 AKR7A3O95154 331 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 DBIP07108 87 aaKnown RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 EPHA3P29320 983 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ANXA11P50995 505 aaKnown RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 MVDP53602 400 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 TXNL4AP83876 142 aaKnown RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 CEACAM7Q14002 265 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 RAB35Q15286 201 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 OTUD3Q5T2D3 398 aaPredicted RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ZNF544Q6NX49 715 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 CLEC2AQ6UVW9 174 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ZNF836Q6ZNA1 936 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 SPATA19Q7Z5L4 167 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 VRK2Q86Y07 508 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 DEPDC4Q8N2C3 294 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 C17orf78Q8N4C9 275 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ZNF525Q8N782 197 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 TMEM99Q8N816 258 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 C1orf162Q8NEQ5 155 aaPredicted RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 OR9K2Q8NGE7 335 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 OR52P1PQ8NH57 321 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ZNF385AQ96PM9 386 aaKnown RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 PAIP2Q9BPZ3 127 aaKnown RBP10.69□□□□□ -0.7
SNHG4-208ENST00000514110 PARD6BQ9BYG5 372 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 AMDHD2Q9Y303 409 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ATP23Q9Y6H3 246 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 COL6A5A8TX70 2615 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 ATRQ13535 2644 aa10.69□□□□□ -0.7
SNHG4-208ENST00000514110 MXRA5Q9NR99 2828 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 CDHR4A6H8M9 788 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
SNHG4-208ENST00000514110 H7C417 338 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 GPIP06744 558 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 UQCRBP14927 111 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 CXCR1P25024 350 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 MPGP29372 298 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 ACAA2P42765 397 aaKnown RBP10.68□□□□□ -0.7
SNHG4-208ENST00000514110 MAP2K6P52564 334 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 WDR4P57081 412 aaKnown RBP10.68□□□□□ -0.7
SNHG4-208ENST00000514110 DSCR9P59020 149 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 LRRC74AQ0VAA2 488 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 BNIP2Q12982 314 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 GNA13Q14344 377 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 OR7A5Q15622 319 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 GSTA3Q16772 222 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 TMEM249Q2WGJ8 235 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 HIKESHIQ53FT3 197 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 C6orf52Q5T4I8 152 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 PEX5LQ8IYB4 626 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 ANKRD42Q8N9B4 389 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 TNFRSF13CQ96RJ3 184 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 SF3B5Q9BWJ5 86 aaKnown RBP10.68□□□□□ -0.7
SNHG4-208ENST00000514110 MANSC1Q9H8J5 431 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
SNHG4-208ENST00000514110 ALPK2Q86TB3 2170 aa10.67□□□□□ -0.7
SNHG4-208ENST00000514110 PLCE1Q9P212 2302 aa10.67□□□□□ -0.7
SNHG4-208ENST00000514110 DSPPQ9NZW4 1301 aa10.67□□□□□ -0.7
SNHG4-208ENST00000514110 AQP7P3A6NL99 342 aa10.67□□□□□ -0.7
SNHG4-208ENST00000514110 ATP6V1G2-DDX39BF2Z307 99 aa10.67□□□□□ -0.7
SNHG4-208ENST00000514110 RFXANKO14593 260 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms