RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 OXSMQ9NWU1 459 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 SDHAF2Q9NX18 166 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 PCDHGB6Q9Y5F9 930 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 DNAJC15Q9Y5T4 150 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 C2orf92A0A1B0GVN3 265 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 CTDSP2O14595 271 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 LRRTM2O43300 516 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 DPM1O60762 260 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 MRPS14O60783 128 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 ZNF780AO75290 641 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 PEPDP12955 493 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 PVALBP20472 110 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 PTBP1P26599 531 aaKnown RBP eCLIP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 CRHR1P34998 444 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 NUDT2P50583 147 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 IFITM3Q01628 133 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 LASP1Q14847 261 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 C12orf45Q8N5I9 185 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 BANPQ8N9N5 519 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 FAM156AQ8NDB6 213 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 ZNF680Q8NEM1 530 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 OR10G3Q8NGC4 313 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 OR2T11Q8NH01 316 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 RP9Q8TA86 221 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 NDNFQ8TB73 568 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 MAGEE2Q8TD90 523 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 SPATA9Q9BWV2 254 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 FAM118AQ9NWS6 357 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 POMPQ9Y244 141 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 VDAC3Q9Y277 283 aa7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 GPR55Q9Y2T6 319 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-219ENST00000514096 CCDC154A6NI56 674 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 NDUFS8O00217 210 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 RASAL1O95294 804 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ALBP02768 609 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 SERPINA7P05543 415 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 STSP08842 583 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CELA3AP09093 270 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 HSF2Q03933 536 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 C17orf67Q0P5P2 114 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 OR7E24Q6IFN5 339 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 TNFAIP8L2Q6P589 184 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 MEX3BQ6ZN04 569 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ZNF767PQ75MW2 155 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 YRDCQ86U90 279 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 B3GNT7Q8NFL0 401 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 OR9I1Q8NGQ6 314 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 RAB8BQ92930 207 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 QRFPRQ96P65 431 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 PRO1933Q9H354 126 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 AGPAT4Q9NRZ5 378 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 GLRX2Q9NS18 164 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 AASSQ9UDR5 926 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 EML6Q6ZMW3 1958 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 BSNQ9UPA5 3926 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 UBR5O95071 2799 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 J3QW42 95 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 AKAP8O43823 692 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 HPGDSO60760 199 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 RPS17P08708 135 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ACAA1P09110 424 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CD46P15529 392 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CHMP24386 653 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 BSGP35613 385 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 RAB13P51153 203 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 PIGFQ07326 219 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 Q5BKY6 102 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 VASNQ6EMK4 673 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 PAMR1Q6UXH9 720 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 RBMS3Q6XE24 437 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 FAM83FQ8NEG4 500 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 FAM110BQ8TC76 370 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ADAMTS17Q8TE56 1095 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ADIPOR1Q96A54 375 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 PPCDCQ96CD2 204 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CDRT15Q96T59 188 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CMSS1Q9BQ75 279 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 FAIM2Q9BWQ8 316 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 EFCAB1Q9HAE3 211 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ZNF222Q9UK12 451 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ADAM30Q9UKF2 790 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 MGAT4AQ9UM21 535 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 SLC6A5Q9Y345 797 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ACOD1A6NK06 481 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 H3BNH8 94 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ZFAND5O76080 213 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 GPR75O95800 540 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 P04436 131 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CCL3P10147 92 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 CAPGP40121 348 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 SSR4P51571 173 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 ATP12AP54707 1039 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 IL18R1Q13478 541 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 OR2B11Q5JQS5 317 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 OR4F3Q6IEY1 312 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 NOXRED1Q6NXP6 359 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 TPRA1Q86W33 373 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 TMEM151AQ8N4L1 468 aa7.23□□□□□ -1.25
LIMCH1-219ENST00000514096 C16orf78Q8WTQ4 265 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms