RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GP1BBP13224 206 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 TSPAN7P41732 249 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 FBXW4P57775 412 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 B3GLCTQ6Y288 498 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 CYB561A3Q8NBI2 242 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 GPR119Q8TDV5 335 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 THAP3Q8WTV1 239 aaPredicted RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 MMP27Q9H306 513 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 PALMDQ9NP74 551 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 INPP5EQ9NRR6 644 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 CAB39Q9Y376 341 aaPredicted RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 ADAM18Q9Y3Q7 739 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 WDFY4Q6ZS81 3184 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 C12orf71A8MTZ7 269 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 CLDN25C9JDP6 229 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 WWP2O00308 870 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 ZFAND5O76080 213 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 NUDT14O95848 222 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 CLUP10909 449 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 APEHP13798 732 aaKnown RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 CXCR1P25024 350 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 UQCRC1P31930 480 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 RPL4P36578 427 aaKnown RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 RPS7P62081 194 aaKnown RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 LTBQ06643 244 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 GXYLT1Q4G148 440 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 FAM199XQ6PEV8 388 aaPredicted RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 SDR9C7Q8NEX9 313 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 OR4K13Q8NH42 304 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 MCFD2Q8NI22 146 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 TTC9Q92623 222 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 UFD1Q92890 307 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 MR1Q95460 341 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 TMCO6Q96DC7 493 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 KTI12Q96EK9 354 aaPredicted RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 DTNBP1Q96EV8 351 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 SH3GL3Q99963 347 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 ULBP3Q9BZM4 244 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 OR51V1Q9H2C8 321 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 FKRPQ9H9S5 495 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 HMG20AQ9NP66 347 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 SLC39A1Q9NY26 324 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 ZNF229Q9UJW7 825 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 FBXL4Q9UKA2 621 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 SF3B6Q9Y3B4 125 aaKnown RBP13.6□□□□□ -0.23
VCAN-211ENST00000513984 PCDHGB6Q9Y5F9 930 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 EML6Q6ZMW3 1958 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 C9J4A7 227 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 ZNF670-ZNF695F2Z2N8 137 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 AKAP8O43823 692 aaKnown RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 GMFGO60234 142 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 SBK2P0C263 348 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 POLR2HP52434 150 aaKnown RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 POU4F2Q12837 409 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 PCOLCEQ15113 449 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 QPRTQ15274 297 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 ZNF322Q6U7Q0 402 aaPredicted RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 LYPD8Q6UX82 237 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 FAM98AQ8NCA5 519 aaKnown RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 MOSPD2Q8NHP6 518 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 TRMT61AQ96FX7 289 aaKnown RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 DDOQ99489 341 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 KATNB1Q9BVA0 655 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 CDADC1Q9BWV3 514 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 WDR12Q9GZL7 423 aaKnown RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 OCEL1Q9H607 264 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 ADGRL4Q9HBW9 690 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
VCAN-211ENST00000513984 TAS2R10Q9NYW0 307 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 MYOTQ9UBF9 498 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 SSR3Q9UNL2 185 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 SLC6A5Q9Y345 797 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 CORINQ9Y5Q5 1042 aa13.59□□□□□ -0.23
VCAN-211ENST00000513984 KLF7O75840 302 aaPredicted RBP13.58□□□□□ -0.24
VCAN-211ENST00000513984 LALBAP00709 142 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 BGLAPP02818 100 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 UMODP07911 640 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 AQP2P41181 271 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 TMED10P49755 219 aaKnown RBP13.58□□□□□ -0.24
VCAN-211ENST00000513984 SUMO3P55854 103 aaPredicted RBP13.58□□□□□ -0.24
VCAN-211ENST00000513984 BDH1Q02338 343 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 C17orf67Q0P5P2 114 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 GGTLC2Q14390 218 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 ZNF846Q147U1 533 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 COL28A1Q2UY09 1125 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 FAM122BQ7Z309 247 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 GRINAQ7Z429 371 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 C10orf53Q8N6V4 93 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 NPEPL1Q8NDH3 523 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 SPRYD4Q8WW59 207 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms