RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ZIK1Q3SY52 487 aaPredicted RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 RBM48Q5RL73 367 aaKnown RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 PRAMEF8Q5VWM4 474 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 PRAMEF7Q5VXH5 474 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 KDM4DQ6B0I6 523 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 FAHD1Q6P587 224 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 GALNT10Q86SR1 603 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 HS3ST5Q8IZT8 346 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 PIK3C3Q8NEB9 887 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 OR2M3Q8NG83 312 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 MIPOL1Q8TD10 442 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 RASSF5Q8WWW0 418 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 HOXB13Q92826 284 aaPredicted RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 DGCR14Q96DF8 476 aaKnown RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 SLC35G5Q96KT7 338 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 SFXN2Q96NB2 322 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 POLDIP3Q9BY77 421 aaKnown RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 C3orf14Q9HBI5 128 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 Q9N2J8 555 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 SDHAF3Q9NRP4 125 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 RASSF1Q9NS23 344 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 NDUFAF4Q9P032 175 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 PPP4R1LQ9P1A2 415 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 DKKL1Q9UK85 242 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 MRTO4Q9UKD2 239 aaKnown RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 HSPE1-MOB4S4R3N1 261 aa8.88□□□□□ -0.99
CCL28-203ENST00000513525 RAI1Q7Z5J4 1906 aaPredicted RBP8.88□□□□□ -0.99
CCL28-203ENST00000513525 ZFHX3Q15911 3703 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 EEF1E1-BLOC1S5C9J1V9 151 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 LINC01387J3KSC0 135 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 HMGN4O00479 90 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 EEF1E1O43324 174 aaKnown RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 PEPDP12955 493 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 RYKP34925 604 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 STARP49675 285 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 SH3BGRP55822 239 aaPredicted RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 EEF1A1P68104 462 aaKnown RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 SRYQ05066 204 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 FOXF2Q12947 444 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 SNTB1Q13884 538 aaKnown RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 KEAP1Q14145 624 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 EEF1A1P5Q5VTE0 462 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 OR5M10Q6IEU7 315 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 SATL1Q86VE3 508 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 SETD9Q8NE22 299 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 OR4K17Q8NGC6 315 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 SLC38A5Q8WUX1 472 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 HDAC2Q92769 488 aaKnown RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 MUS81Q96NY9 551 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 ZNF300Q96RE9 604 aaPredicted RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 ZNF607Q96SK3 696 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 PSD2Q9BQI7 771 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 AMBRA1Q9C0C7 1298 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 CXXC4Q9H2H0 198 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 CLEC4MQ9H2X3 399 aaPredicted RBP8.87□□□□□ -0.99
CCL28-203ENST00000513525 NTMQ9P121 344 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 P2RX2Q9UBL9 471 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 BLOC1S6Q9UL45 172 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 U3KQV3 271 aa8.87□□□□□ -0.99
CCL28-203ENST00000513525 SETD2Q9BYW2 2564 aaPredicted RBP8.86□□□□□ -0.99
CCL28-203ENST00000513525 IGLV3-32A0A0A0MS00 114 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 LOC100130705A0A1B0GUX0 176 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 ARRDC5A6NEK1 342 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 C17orf51A8MQB3 221 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 EMC8O43402 210 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 SCO2O43819 266 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 SERPINB7O75635 380 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 NKX2-2O95096 273 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 CLIC3O95833 236 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 CRHP06850 196 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 EPXP11678 715 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 PRKACGP22612 351 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TTKP33981 857 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 CLK3P49761 638 aaKnown RBP8.86□□□□□ -0.99
CCL28-203ENST00000513525 DAPP51397 102 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 ART1P52961 327 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TPD52P55327 224 aaPredicted RBP8.86□□□□□ -0.99
CCL28-203ENST00000513525 GABARAPL2P60520 117 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 PRR5P85299 388 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TP53BP2Q13625 1128 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 GLYR1Q49A26 553 aaPredicted RBP8.86□□□□□ -0.99
CCL28-203ENST00000513525 ZNF691Q5VV52 312 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TNFAIP8L2Q6P589 184 aaPredicted RBP8.86□□□□□ -0.99
CCL28-203ENST00000513525 TSEN54Q7Z6J9 526 aaKnown RBP8.86□□□□□ -0.99
CCL28-203ENST00000513525 CYP4Z1Q86W10 505 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 KRT73Q86Y46 540 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 ALDH16A1Q8IZ83 802 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 BBS10Q8TAM1 723 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 FBLIM1Q8WUP2 373 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 NRGNQ92686 78 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 TMEM19Q96HH6 336 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 PIP5K1AQ99755 562 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 FOXC2Q99958 501 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 SPATA5L1Q9BVQ7 753 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
CCL28-203ENST00000513525 PIGMQ9H3S5 423 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms