RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 COL4A2P08572 1712 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 GREB1Q4ZG55 1949 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 IGHV3-38A0A0C4DH36 116 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 SPTY2D1-AS1A0A0U1RR47 76 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 A0A1W2PQ67 120 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 MEX3AA1L020 520 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 KRT87PA6NCN2 255 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 SERINC4A6NH21 518 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 SLC9B1P1A6NJY1 282 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RNF212BA8MTL3 300 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ARHGEF33A8MVX0 844 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 KCNK1O00180 336 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 EI24O14681 340 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RRP8O43159 456 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 LATO43561 262 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 VEGFDO43915 354 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 NME2P1O60361 137 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 BCAS2O75934 225 aaPredicted RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 TXNDC12O95881 172 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 MT-ATP6P00846 226 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CSF2P04141 144 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 FHP07954 510 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ALPIP09923 528 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 PIRTP0C851 137 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 GLRA1P23415 457 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CCNCP24863 283 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 EDNRAP25101 427 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 HSPA9P38646 679 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 CD86P42081 329 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 GNPDA1P46926 289 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RGRP47804 291 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CSNK1DP48730 415 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 LIMK2P53671 638 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RPL27P61353 136 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 AP1S1P61966 158 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 GBE1Q04446 702 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CCDC173Q0VFZ6 552 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 DPYSQ14117 519 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CRMP1Q14194 572 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 DPYSL3Q14195 570 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 FZD2Q14332 565 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 LASP1Q14847 261 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 IRF4Q15306 451 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ELOCQ15369 112 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 HES3Q5TGS1 186 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 REP15Q6BDI9 236 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RAET1GQ6H3X3 334 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 PNCKQ6P2M8 343 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ZNF841Q6ZN19 808 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 GCNT7Q6ZNI0 430 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 BZW1Q7L1Q6 419 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 GTSCR1Q86UQ5 136 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 PARGQ86W56 976 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 NPWQ8N729 165 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ZNF781Q8N8C0 355 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 TMEM185AQ8NFB2 350 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 OR56A4Q8NGH8 313 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 OR1K1Q8NGR3 316 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 KIAA1524Q8TCG1 905 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RAPGEF5Q92565 580 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 FCGR1BQ92637 280 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 P3H4Q92791 437 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 NUS1Q96E22 293 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 TTC25Q96NG3 672 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 RNF157Q96PX1 679 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 SMIM14Q96QK8 99 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 TAAR6Q96RI8 345 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 PKP2Q99959 881 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 SPATA16Q9BXB7 569 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 POLR1EQ9GZS1 481 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 TCEAL2Q9H3H9 227 aaPredicted RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 LIME1Q9H400 295 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 NT5DC2Q9H857 520 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 SLC25A19Q9HC21 320 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 MRPL40Q9NQ50 206 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 TRIM10Q9UDY6 481 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 FETUBQ9UGM5 382 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 CIDEBQ9UHD4 219 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 LCMT1Q9UIC8 334 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 DIMT1Q9UNQ2 313 aaKnown RBP3.45□□□□□ -1.86
HTT-210ENST00000512909 TFR2Q9UP52 801 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 NEUROG3Q9Y4Z2 214 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ALG6Q9Y672 507 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 MYO16Q9Y6X6 1858 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 MYOFQ9NZM1 2061 aa3.45□□□□□ -1.86
HTT-210ENST00000512909 ZDBF2Q9HCK1 2354 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 THADAQ6YHU6 1953 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 OBSL1O75147 1896 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 IGHV3-20A0A0C4DH32 117 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 C1orf232A0A0U1RR37 186 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 CFAP73A6NFT4 308 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 G3V2L1 256 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 ZW10O43264 779 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 MFSD11O43934 449 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 CST8O60676 142 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 SLC25A14O95258 325 aaPredicted RBP3.44□□□□□ -1.86
HTT-210ENST00000512909 NUDT14O95848 222 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 MT-ND1P03886 318 aa3.44□□□□□ -1.86
HTT-210ENST00000512909 FCGR3AP08637 254 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms