RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 HEATR5AQ86XA9 2040 aa6.35□□□□□ -1.39
USP46-208ENST00000512656 IGHV3-15A0A0B4J1V0 119 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 RNF103-CHMP3A0A140T963 221 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 DPRXA6NFQ7 191 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ZNF814B7Z6K7 855 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 RNASET2O00584 256 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 SMAD9O15198 467 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 DNPH1O43598 174 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 TLX2O43763 284 aaPredicted RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 SPAG7O75391 227 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 LYZL6O75951 148 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 SNUPNO95149 360 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 IFNA2P01563 188 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 BPGMP07738 259 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 GUSBP08236 651 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 NUDT17P0C025 328 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 UBTFL6P0CB48 400 aaPredicted RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 G6PDP11413 515 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 CDKN1AP38936 164 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 APOBEC1P41238 236 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 DIO1P49895 249 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ANXA11P50995 505 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 SESN3P58005 492 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 DSCR9P59020 149 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 HPCAP84074 193 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 FAPQ12884 760 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 SKP2Q13309 424 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 GPR68Q15743 365 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 NRF1Q16656 503 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ARHGAP11BQ3KRB8 267 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 SYT14P1Q58G82 188 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ANXA8L1Q5VT79 327 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 AGAP6Q5VW22 663 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 FBXW9Q5XUX1 488 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ZCCHC23Q6ZST2 131 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 MTDHQ86UE4 582 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 DTX2Q86UW9 622 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 UBE2J2Q8N2K1 259 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 KBTBD8Q8NFY9 601 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 OR8J2Q8NGG1 315 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 OR5D16Q8NGK9 328 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 OR2W6PQ8NHA6 318 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ZNF563Q8TA94 476 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 PIGXQ8TBF5 258 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 MIPOL1Q8TD10 442 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 TCP10LQ8TDR4 215 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 APH1AQ96BI3 265 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 TRIM44Q96DX7 344 aaPredicted RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 C3orf30Q96M34 536 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ADAD1Q96M93 576 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 RHNO1Q9BSD3 238 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 TRIM2Q9C040 744 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ZNF350Q9GZX5 532 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 SLCO5A1Q9H2Y9 848 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 ASIC5Q9NY37 505 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 SLC17A7Q9P2U7 560 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 LGALS13Q9UHV8 139 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 NOSIPQ9Y314 301 aaKnown RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 HDGFL3Q9Y3E1 203 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 WDR45Q9Y484 360 aa6.34□□□□□ -1.39
USP46-208ENST00000512656 MAGED1Q9Y5V3 778 aaPredicted RBP6.34□□□□□ -1.39
USP46-208ENST00000512656 RTTNQ86VV8 2226 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 FREM1Q5H8C1 2179 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PRSS51A0A1B0GVH4 220 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 CIB4A0PJX0 185 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 OR5H1A6NKK0 313 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 CCT8L1PA6NM43 557 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 C9JVG2 144 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ABCD4O14678 606 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 SHOXO15266 292 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 KIAA0513O60268 411 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 FCMRO60667 390 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 EIF1BO60739 113 aaKnown RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 MRPL33O75394 65 aaKnown RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 UGT2B17O75795 530 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PGM3O95394 542 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 H6PDO95479 791 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 IGHV4-39P01824 125 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 MYZAPP0CAP1 466 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 DHRS4L1P0CG22 281 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 UQCRBP14927 111 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 COX5AP20674 150 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 UQCRC2P22695 453 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 IGHV1-2P23083 117 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PTAFRP25105 342 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ACVR1BP36896 505 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 MAGEA8P43361 318 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 HTR3AP46098 478 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 KHKP50053 298 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 MAP2K6P52564 334 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 TXNL4AP83876 142 aaKnown RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 GNA13Q14344 377 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 DPY19L1Q2PZI1 675 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PGGHGQ32M88 737 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 C1QTNF12Q5T7M4 302 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 OR4F3Q6IEY1 312 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 OR7E24Q6IFN5 339 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 CYP2R1Q6VVX0 501 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms