RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 PRR5LQ6MZQ0 368 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 ACSM5Q6NUN0 579 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 TMEM65Q6PI78 240 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 SHC4Q6S5L8 630 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.5□□□□□ -1.53
CHD1-208ENST00000512392 ZNF836Q6ZNA1 936 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 SMIM15Q7Z3B0 74 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 CMTM1Q8IZ96 169 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 CENPSQ8N2Z9 138 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 MDS2Q8NDY4 140 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 OR5B17Q8NGF7 314 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 IL17DQ8TAD2 202 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 DYDC1Q8WWB3 177 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 NUS1Q96E22 293 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 TMEM121Q9BTD3 319 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 ASB7Q9H672 318 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 ALG9Q9H6U8 611 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 GID8Q9NWU2 228 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 ZNF319Q9P2F9 582 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 GHRLQ9UBU3 117 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 OPN4Q9UHM6 478 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 SLC17A4Q9Y2C5 497 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 CSNK1G3Q9Y6M4 447 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 ELP1O95163 1332 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 ANKRD30BQ9BXX2 1392 aa5.5□□□□□ -1.53
CHD1-208ENST00000512392 SLC22A23A1A5C7 686 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 WDR27A2RRH5 827 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TVP23AA6NH52 213 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 hCG_2039718K7EN88 272 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 ZNF195O14628 629 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 GPR137BO60478 399 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 STX10O60499 249 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 B4GALT3O60512 393 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 UMODP07911 640 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 CHRNB1P11230 501 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 DPEP1P16444 411 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 M6PRP20645 277 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 GLRA1P23415 457 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TNFSF8P32971 234 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 GLUD2P49448 558 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 XGP55808 180 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 PAX2Q02962 417 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TRAF2Q12933 501 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 MED21Q13503 144 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 MEF2DQ14814 521 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 GUK1Q16774 197 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 IRAK1BP1Q5VVH5 260 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 VWA1Q6PCB0 445 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 DHRS11Q6UWP2 260 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 LRRC31Q6UY01 552 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 DLK2Q6UY11 383 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TMEM184AQ6ZMB5 413 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 ANKRD37Q7Z713 158 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 RALGPS2Q86X27 583 aaPredicted RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 PRSS35Q8N3Z0 413 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 Q8N402 240 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 CPSF7Q8N684 471 aaKnown RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 ZNF738Q8NE65 137 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 OR5M9Q8NGP3 310 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 OR14A16Q8NHC5 309 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 PYDC1Q8WXC3 89 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 NXPE2Q96DL1 559 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 CENPNQ96H22 339 aaPredicted RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 GALNT9Q9HCQ5 603 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 SLC12A6Q9UHW9 1150 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 STOML2Q9UJZ1 356 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 ZNF221Q9UK13 617 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 ERVW-1Q9UQF0 538 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TCF19Q9Y242 345 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 YARS2Q9Y2Z4 477 aaKnown RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 PBRM1Q86U86 1689 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 SLC22A20A6NK97 555 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 PDHXO00330 501 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 GAPDHSO14556 408 aaPredicted RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 DYNC1I1O14576 645 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 MFAP3LO75121 409 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 KRT33AO76009 404 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 ME2P23368 584 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 GCAP28676 217 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 SERPINB1P30740 379 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 HOXA7P31268 230 aaPredicted RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 QARSP47897 775 aaKnown RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 HCAR3P49019 387 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 CX3CR1P49238 355 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 PSME3P61289 254 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 MFGE8Q08431 387 aaPredicted RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 TAF10Q12962 218 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 SNAI3Q3KNW1 292 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 SLC36A2Q495M3 483 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TIMM23BQ5SRD1 257 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TEDDM1Q5T9Z0 273 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 FAM122CQ6P4D5 195 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 RAD9BQ6WBX8 426 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 USP43Q70EL4 1123 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 TSEN54Q7Z6J9 526 aaKnown RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 MREGQ8N565 214 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 JAGN1Q8N5M9 183 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.49□□□□□ -1.53
CHD1-208ENST00000512392 ACBD4Q8NC06 268 aa5.49□□□□□ -1.53
CHD1-208ENST00000512392 OR2Y1Q8NGV0 311 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms