RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 KLF4O43474 513 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CHP2O43745 196 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 EIF4E2O60573 245 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 NME6O75414 186 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 LYPD3O95274 346 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 GNAO1P09471 354 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CCDC159P0C7I6 412 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 ICAM2P13598 275 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 FPR3P25089 353 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 ACAA2P42765 397 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 GSSP48637 474 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC26A5P58743 744 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 GABARAPL2P60520 117 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CSNK2BP67870 215 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 RNF4P78317 190 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 MYBPC1Q00872 1141 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 TOP3AQ13472 1001 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 EFR3AQ14156 821 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 RBM48Q5RL73 367 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 PDZK1Q5T2W1 519 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 SHEQ5VZ18 495 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 HLA-DQA1Q5Y7H0 255 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC25A25Q6KCM7 469 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 PGBD2Q6P3X8 592 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 PAPD4Q6PIY7 484 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 HSDL2Q6YN16 418 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 MBOAT2Q6ZWT7 520 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 OLIG3Q7RTU3 272 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 DND1Q8IYX4 353 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 OR4N2Q8NGD1 307 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 OR5M3Q8NGP4 307 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 VANGL1Q8TAA9 524 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 ELP5Q8TE02 316 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CYGBQ8WWM9 190 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 IMMP1LQ96LU5 166 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CNBD2Q96M20 576 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 MUS81Q96NY9 551 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 APOL4Q9BPW4 351 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC19A3Q9BZV2 496 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 TP63Q9H3D4 680 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 KRCC1Q9NPI7 259 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF223Q9UK11 482 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 MYRFQ9Y2G1 1151 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 A0A087WUU8 490 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 ZAR1LA6NP61 321 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TFECO14948 347 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 MPZL2O60487 215 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 OSMP13725 252 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 GGT2P36268 569 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC6A8P48029 635 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TMED10P49755 219 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 CLK3P49761 638 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 UGT2B15P54855 530 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 CTBP2P56545 445 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 NRG3P56975 720 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TAS2R41P59536 307 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 PPP1R8Q12972 351 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TSPAN31Q12999 210 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 GANABQ14697 944 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 SEC23BQ15437 767 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 MEP1AQ16819 746 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC25A30Q5SVS4 291 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 PLAG1Q6DJT9 500 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 PODNL1Q6PEZ8 512 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 PLEKHM3Q6ZWE6 761 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 LIX1LQ8IVB5 337 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 DEPDC4Q8N2C3 294 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF321PQ8N8H1 164 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 AQP11Q8NBQ7 271 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 OR4K5Q8NGD3 323 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 OR4C3Q8NH37 302 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 M1APQ8TC57 530 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 DNAJA4Q8WW22 397 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TRUB1Q8WWH5 349 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC41A3Q96GZ6 507 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 Q96MF0 132 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 SECISBP2Q96T21 854 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 PRSS27Q9BQR3 290 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 LAT2Q9GZY6 243 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TMEM27Q9HBJ8 222 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 MMP25Q9NPA2 562 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 PLCXD1Q9NUJ7 323 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 RLIMQ9NVW2 624 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 REV1Q9UBZ9 1251 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 BLOC1S6Q9UL45 172 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 TMEM5Q9Y2B1 443 aa9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 MAP1AP78559 2803 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-217ENST00000512274 NINQ8N4C6 2090 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 NSD1Q96L73 2696 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 IGLV3-32A0A0A0MS00 114 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 A6NHS1 94 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 ETV2O00321 342 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 SCDO00767 359 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 ARHGEF9O43307 516 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OR10H3O60404 316 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 FADS1O60427 444 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 BCAS1O75363 584 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 CRLF1O75462 422 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms