RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 EML4Q9HC35 981 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 PNPLA3Q9NST1 481 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 NUDT4Q9NZJ9 180 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 TRPC4Q9UBN4 977 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 GNPTGQ9UJJ9 305 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 DDX19BQ9UMR2 479 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 PLCL2Q9UPR0 1127 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ALG6Q9Y672 507 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 IGHV3-20A0A0C4DH32 117 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 IQCMA0A1B0GVH7 501 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 SMIM30A4D0T7 59 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 OR5H15A6NDH6 313 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 RASGRF2O14827 1237 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 TFECO14948 347 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 P2RX6O15547 441 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 BUB1O43683 1085 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 ZBTB14O43829 449 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 JCHAINP01591 159 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 HOXC4P09017 264 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CCDC130P13994 396 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 GPR183P32249 361 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 GNPDA1P46926 289 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CAPZBP47756 277 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 SERPINH1P50454 418 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 ERVK-16P61578 105 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 NUCB2P80303 420 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC3A1Q07837 685 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 GPR50Q13585 617 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 SGCBQ16585 318 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 AARDQ4LEZ3 155 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 MS4A13Q5J8X5 152 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 KCTD11Q693B1 232 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CYB5R2Q6BCY4 276 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 GALNT17Q6IS24 598 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 C22orf39Q6P5X5 142 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM92BQ6ZTR7 304 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CLEC20AQ6ZU45 233 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF619Q8N2I2 560 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 RPRMLQ8N4K4 120 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 OR5M9Q8NGP3 310 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CCDC110Q8TBZ0 833 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 BCL2L2Q92843 193 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 PDLIM5Q96HC4 596 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 EPSTI1Q96J88 318 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CABS1Q96KC9 395 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 MYCBPQ99417 103 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 ATP6V0BQ99437 205 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 ACAT2Q9BWD1 397 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 TBC1D10AQ9BXI6 508 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 OSBPL8Q9BZF1 889 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 UBXN6Q9BZV1 441 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC5A7Q9GZV3 580 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 PARLQ9H300 379 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 DCTPP1Q9H773 170 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 VIPAS39Q9H9C1 493 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC7A10Q9NS82 523 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 KLK11Q9UBX7 282 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 MTRF1LQ9UGC7 380 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 MRPS18CQ9Y3D5 142 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 NUP210LQ5VU65 1888 aa2.87□□□□□ -1.95
TOPBP1-208ENST00000511439 CR1P17927 2039 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 IGHV3OR16-10A0A075B7F0 116 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A1W2PRV1 198 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 CCDC162PA2VCL2 907 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SRRM4A7MD48 611 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SCAMP2O15127 329 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SIGLEC5O15389 551 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 TNFSF12O43508 249 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 GPRIN2O60269 458 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 NEMFO60524 1076 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 KERAO60938 352 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 MTRF1O75570 445 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 CLDN9O95484 217 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 F10P00742 488 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 IGLV3-27P01718 113 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 TNNC2P02585 160 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SELEP16581 610 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF24P17028 368 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 MMP11P24347 488 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 ACKR3P25106 362 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 ADORA2BP29275 332 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 NME5P56597 212 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 EVCP57679 992 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 ELP6Q0PNE2 266 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 RPS6KA1Q15418 735 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SNAI3Q3KNW1 292 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 FBXL19-AS1Q494R0 122 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 GLIPR1L2Q4G1C9 344 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 GPRC6AQ5T6X5 926 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 PRAMEF8Q5VWM4 474 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 MLIPQ5VWP3 458 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 IRGCQ6NXR0 463 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC39A4Q6P5W5 647 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 ABRAXAS1Q6UWZ7 409 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 CCBE1Q6UXH8 406 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 CYP4V2Q6ZWL3 525 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 NLRP14Q86W24 1093 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC43A2Q8N370 569 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms