RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 UBL3O95164 117 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 CD1AP06126 327 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 EPXP11678 715 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 EDNRAP25101 427 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 DIO1P49895 249 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 PGDP52209 483 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 TNK1Q13470 666 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 NNATQ16517 81 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 SLC35D3Q5M8T2 416 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 KIAA0895LQ68EN5 471 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 TOMM5Q8N4H5 51 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 DNAJC5GQ8N7S2 189 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 GTPBP2Q9BX10 602 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 DPAGT1Q9H3H5 408 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 BRD7Q9NPI1 651 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 LRIT1Q9P2V4 623 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 CLEC4AQ9UMR7 237 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 XIRP2A4UGR9 3374 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 B4DGG1 531 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 CCR5P51681 352 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 IGLV3-21P80748 117 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 FZD2Q14332 565 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 NDUFAF6Q330K2 333 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 CCDC58Q4VC31 144 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 BCORP1Q8N888 145 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 OR5H6Q8NGV6 325 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF578Q96N58 590 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 NMNAT3Q96T66 252 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 SMAD5Q99717 465 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 CD207Q9UJ71 328 aa16.45■□□□□ 0.22
CCHCR1-228ENST00000509552 ANKRD34BA5PLL1 514 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 LRRN3E7EW58 273 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ARPC3O15145 178 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 HYAL3O43820 417 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 CPNE3O75131 537 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 OR7A10O76100 309 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 UCHL1P09936 223 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 CT45A8P0DMV1 189 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 CT45A9P0DMV2 189 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 SNRPBP14678 240 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ATF1P18846 271 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 GPR3P46089 330 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 BLKP51451 505 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 MMP15P51511 669 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 MAT1AQ00266 395 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ERV3-1Q14264 604 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 CT45A2Q5DJT8 189 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 BAIAP2L2Q6UXY1 529 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 OVCH1Q7RTY7 1134 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 SLITRK4Q8IW52 837 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF440Q8IYI8 595 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 C16orf52Q8NHV5 167 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 HSPA12BQ96MM6 686 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 MFRPQ9BY79 579 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 OR10A5Q9H207 317 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 LRRN3Q9H3W5 708 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ERVK-19Q9WJR5 959 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 COL4A2P08572 1712 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF879B4DU55 563 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 FOXS1O43638 330 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 SRP9P49458 86 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 PRPS1P60891 318 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 BTG2P78543 158 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 HSD17B12Q53GQ0 312 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 SNAP47Q5SQN1 464 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 BCL2L15Q5TBC7 163 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 NPEPL1Q8NDH3 523 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 OR6C4Q8NGE1 309 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 OR6K6Q8NGW6 343 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 OR4C3Q8NH37 302 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 SLC19A3Q9BZV2 496 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 MED28Q9H204 178 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 ZCCHC4Q9H5U6 513 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 NRIP3Q9NQ35 241 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 NCDNQ9UBB6 729 aa16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 MRPS7Q9Y2R9 242 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-228ENST00000509552 A0A0A6YYJ9 748 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 GPRIN2O60269 458 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 IFNA16P05015 189 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 SPI1P17947 270 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 EVI2BP34910 448 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 HSF2Q03933 536 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 RAB30Q15771 203 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 ISXQ2M1V0 245 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 GHDCQ8N2G8 530 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF671Q8TAW3 534 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 PHYHIPQ92561 330 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 ZFP3Q96NJ6 502 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 OR14A2Q96R54 314 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 CYP8B1Q9UNU6 501 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 NUBP2Q9Y5Y2 271 aa16.43■□□□□ 0.22
CCHCR1-228ENST00000509552 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 NSA2O95478 260 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 BTCP35070 178 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 SLC36A2Q495M3 483 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 LYPD4Q6UWN0 246 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 YIPF5Q969M3 257 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 C3orf49Q96BT1 292 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms