RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MRTO4Q9UKD2 239 aaKnown RBP13.58□□□□□ -0.24
PHF3-209ENST00000509330 ASPMQ8IZT6 3477 aa13.58□□□□□ -0.24
PHF3-209ENST00000509330 ADAMTS20P59510 1910 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 CCDC182A6NF36 153 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 J3QLW9 94 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 ALOX12BO75342 701 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 ZNF19P17023 458 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHF3-209ENST00000509330 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
PHF3-209ENST00000509330 RPL13AP3Q6NVV1 102 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 ZNF322Q6U7Q0 402 aaPredicted RBP13.57□□□□□ -0.24
PHF3-209ENST00000509330 APCDD1LQ8NCL9 501 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 FAM83FQ8NEG4 500 aaPredicted RBP13.57□□□□□ -0.24
PHF3-209ENST00000509330 MMP27Q9H306 513 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 FBXO8Q9NRD0 319 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 SHISA8B8ZZ34 492 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 TSPAN2O60636 221 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 OR7A10O76100 309 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 AZGP1P25311 298 aaKnown RBP13.57□□□□□ -0.24
PHF3-209ENST00000509330 HOXA6P31267 233 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 GRK6P43250 576 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 RGS21Q2M5E4 152 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 ARL9Q6T311 187 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 FAM71CQ8NEG0 241 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 SMPDL3BQ92485 455 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 FOXN4Q96NZ1 517 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 HOXD1Q9GZZ0 328 aa13.57□□□□□ -0.24
PHF3-209ENST00000509330 IRGMA1A4Y4 181 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 PYCR1P32322 319 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 EVI2BP34910 448 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 OR12D2P58182 307 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 SLC3A1Q07837 685 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 BIKQ13323 160 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 RABEPKQ7Z6M1 372 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 CEP76Q8TAP6 659 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 NAT6Q93015 286 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 C4orf36Q96KX1 117 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 CEP19Q96LK0 163 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 OR11A1Q9GZK7 315 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 CHRNA9Q9UGM1 479 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 VDAC3Q9Y277 283 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 EXOGQ9Y2C4 368 aaKnown RBP13.56□□□□□ -0.24
PHF3-209ENST00000509330 A0A1W2PQL4 384 aaPredicted RBP13.56□□□□□ -0.24
PHF3-209ENST00000509330 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 MEN1O00255 615 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 SLC30A4O14863 429 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 OCM2P0CE71 109 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 OCMP0CE72 109 aaPredicted RBP13.56□□□□□ -0.24
PHF3-209ENST00000509330 ACVR1BP36896 505 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 TP53I3Q53FA7 332 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ARHGAP11AQ6P4F7 1023 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.56□□□□□ -0.24
PHF3-209ENST00000509330 S100ZQ8WXG8 99 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 TAAR8Q969N4 342 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ADGRL4Q9HBW9 690 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 RPRD1BQ9NQG5 326 aaKnown RBP13.56□□□□□ -0.24
PHF3-209ENST00000509330 ZNF337Q9Y3M9 751 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 SLC22A31A6NKX4 558 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ZNF670-ZNF695F2Z2N8 137 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 SELENOFO60613 162 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 IFNGP01579 166 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 IGHA1P01876 353 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 OPN1LWP04000 364 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 CELA2AP08217 269 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 SBK2P0C263 348 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 AHCYP23526 432 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 CXCR1P25024 350 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 RPS27P42677 84 aaKnown RBP13.56□□□□□ -0.24
PHF3-209ENST00000509330 CTXN1P60606 82 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ZNF74Q16587 644 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 FAM27D1Q5T7N8 215 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 LEG1Q6P5S2 330 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 MARCH9Q86YJ5 346 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 SLITRK4Q8IW52 837 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 LAX1Q8IWV1 398 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 PARP16Q8N5Y8 322 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ZNF485Q8NCK3 441 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 ARRDC1-AS1Q9H2J1 176 aa13.56□□□□□ -0.24
PHF3-209ENST00000509330 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 A0A1W2PPK0 400 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 MSL3P1P0C860 447 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 PNLIPP16233 465 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 E2F1Q01094 437 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 DCDC5Q6ZRR9 648 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 KDM8Q8N371 416 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 PLPP5Q8NEB5 264 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 SPSB2Q99619 263 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 TIMP4Q99727 224 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 C14orf119Q9NWQ9 140 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 ICAM5Q9UMF0 924 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 SF3B6Q9Y3B4 125 aaKnown RBP13.55□□□□□ -0.24
PHF3-209ENST00000509330 NPFFR2Q9Y5X5 522 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 TTC36A6NLP5 189 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 D6RAR5 112 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 TOX3O15405 576 aaPredicted RBP13.55□□□□□ -0.24
PHF3-209ENST00000509330 AKAP8O43823 692 aaKnown RBP13.55□□□□□ -0.24
PHF3-209ENST00000509330 SNX4O95219 450 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 GPANK1O95872 356 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 TFP02787 698 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 CD40LGP29965 261 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms