RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ITGA10O75578 1167 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 NCR1O76036 304 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 GABRA3P34903 492 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 RAG2P55895 527 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 SKP1P63208 163 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 GPR176Q14439 515 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PLA1AQ53H76 456 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 GARNL3Q5VVW2 1013 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF613Q6PF04 617 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 TTLL10Q6ZVT0 673 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 C11orf74Q86VG3 221 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC37A3Q8NCC5 494 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 BBS1Q8NFJ9 593 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 OR4N2Q8NGD1 307 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 RIT1Q92963 219 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 RBM18Q96H35 190 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 DCLRE1CQ96SD1 692 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ELF4Q99607 663 aaPredicted RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PRRX2Q99811 253 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PRSS27Q9BQR3 290 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 RAB33BQ9H082 229 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 MED28Q9H204 178 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 DPAGT1Q9H3H5 408 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ABRACLQ9P1F3 81 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 MRPS33Q9Y291 106 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC35A3Q9Y2D2 325 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 MED31Q9Y3C7 131 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 NUBP2Q9Y5Y2 271 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 CACNG2Q9Y698 323 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 MUC6Q6W4X9 2439 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 TRAV1-2A0A0B4J238 106 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 C7orf66A4D0T2 115 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 A6NL46 340 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM150CB9EJG8 249 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 H3BMH7 237 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 CDC42EP2O14613 210 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 LRRTM2O43300 516 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 HYAL3O43820 417 aaPredicted RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PIP5K1CO60331 668 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 CTNSO60931 367 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 CPNE3O75131 537 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 CD1AP06126 327 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 GUSBP08236 651 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ZGLP1P0C6A0 271 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 IFI30P13284 250 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PRG2P13727 222 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 NID1P14543 1247 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 GLB1P16278 677 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 CD1CP29017 333 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 EMDP50402 254 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PGDP52209 483 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 NRG3P56975 720 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PSG6Q00889 435 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 FOXK2Q01167 660 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 NNATQ16517 81 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ZSWIM7Q19AV6 140 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 Q5BKY6 102 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 TCTE1Q5JU00 501 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 LYSMD4Q5XG99 296 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 SFXN4Q6P4A7 337 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PXKQ7Z7A4 578 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF595Q8IYB9 648 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 DTWD2Q8NBA8 298 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 OR51Q1Q8NH59 317 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 OR4C6Q8NH72 309 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ABHD4Q8TB40 342 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PHYHIPQ92561 330 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 MRPL48Q96GC5 212 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 TEAD3Q99594 435 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF559Q9BR84 538 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 BEX2Q9BXY8 128 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ABCG5Q9H222 651 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 ISG20L2Q9H9L3 353 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM27Q9HBJ8 222 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 EMC7Q9NPA0 242 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 PRTFDC1Q9NRG1 225 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 MCUBQ9NWR8 336 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 DHCR7Q9UBM7 475 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 A0A0G2JMP0 313 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 A0A0X1KG70 313 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 FITM1A5D6W6 292 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 DUX1O43812 170 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC2A10O95528 541 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 IFNGP01579 166 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 GKN3PP0CG01 181 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF3P17036 446 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR1D4P47884 311 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ARRB1P49407 418 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 HSD11B2P80365 405 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 PLAURQ03405 335 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR1Q1Q15612 314 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 MRPL2Q5T653 305 aaKnown RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR10H4Q8NGA5 316 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR4M2Q8NGB6 313 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR6C4Q8NGE1 309 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 NACC2Q96BF6 587 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR2M2Q96R28 347 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 NUDT22Q9BRQ3 303 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ACTR6Q9GZN1 396 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms