RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FAM86B2P0C5J1 330 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 NCK1P16333 377 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ACTR1BP42025 376 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 EVX1P49640 407 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR4D2P58180 307 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 HNRNPKP61978 463 aaKnown RBP eCLIP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ERVK-25P63136 954 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DCDP81605 110 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PMPCAQ10713 525 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PEA15Q15121 130 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 FCN2Q15485 313 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 TRAM1Q15629 374 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 MPPED2Q15777 294 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 NTRK2Q16620 822 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 QRICH1Q2TAL8 776 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF678Q5SXM1 525 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 TXNRD3NBQ6F5E7 133 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PTRHD1Q6GMV3 140 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 KIAA0930Q6ICG6 404 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PRSS55Q6UWB4 352 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 GSG1LQ6UXU4 331 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DLEU7Q6UYE1 221 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DET1Q7L5Y6 550 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ASCL5Q7RTU5 278 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DPPA2Q7Z7J5 298 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DAW1Q8N136 415 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 THEM5Q8N1Q8 247 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PQLC3Q8N755 202 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 EXD3Q8N9H8 876 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 POMGNT2Q8NAT1 580 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM71CQ8NEG0 241 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR9I1Q8NGQ6 314 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR6K3Q8NGY3 331 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR6X1Q8NH79 312 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 AKR7LQ8NHP1 331 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM151AQ8WW52 585 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 TM9SF4Q92544 642 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 GGHQ92820 318 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PYCR2Q96C36 320 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PHF21BQ96EK2 531 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM120BQ96EK7 910 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 RRNAD1Q96FB5 475 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 WBP1Q96G27 269 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF419Q96HQ0 510 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CMTM3Q96MX0 182 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR4K3Q96R72 315 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CCNL2Q96S94 520 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 SOSTQ9BQB4 213 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF559Q9BR84 538 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PI4K2AQ9BTU6 479 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 THUMPD3Q9BV44 507 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 TRIM62Q9BVG3 475 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 RIOK2Q9BVS4 552 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ABCG5Q9H222 651 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ESRP2Q9H6T0 727 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PPP1R3EQ9H7J1 279 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 EVA1AQ9H8M9 152 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 IL21RQ9HBE5 538 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 KRCC1Q9NPI7 259 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC52A3Q9NQ40 469 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CTPS2Q9NRF8 586 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 SMCO4Q9NRQ5 59 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CISHQ9NSE2 258 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 SNTG1Q9NSN8 517 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 C1orf109Q9NX04 203 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 MIOSQ9NXC5 875 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PDP1Q9P0J1 537 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 KLHL8Q9P2G9 620 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF624Q9P2J8 865 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR12D3Q9UGF7 316 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF490Q9ULM2 529 aaPredicted RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 NDRG2Q9UN36 371 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PPIEQ9UNP9 301 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CA5BQ9Y2D0 317 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DLGAP4Q9Y2H0 992 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CARHSP1Q9Y2V2 147 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DNAJC15Q9Y5T4 150 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CFAP47Q6ZTR5 3102 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 PLXNB2O15031 1838 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 MYO15AQ9UKN7 3530 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DMDP11532 3685 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 DOCK1Q14185 1865 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 EPG5Q9HCE0 2579 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 BRWD1Q9NSI6 2320 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ATRXP46100 2492 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ZFC3H1O60293 1989 aaKnown RBP4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 A0A1W2PRB8 838 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PLSCR5A0PG75 271 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GAGE12JA6NER3 117 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 ANKRD61A6NGH8 418 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 MYO1GB0I1T2 1018 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 NPIPB9F8W1W9 429 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 M0QYT0 321 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 M0QZK8 103 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 NDUFS8O00217 210 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 PIP5K1BO14986 540 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC16A4O15374 487 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GMFGO60234 142 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 HPGDSO60760 199 aa4.17□□□□□ -1.74
PDLIM5-211ENST00000508531 GGCTO75223 188 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms