RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NDUFA13Q9P0J0 144 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 FAM153AQ9UHL3 310 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 EXOSC1Q9Y3B2 195 aaKnown RBP3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 PRRC2CQ9Y520 2896 aaKnown RBP3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 WDR19Q8NEZ3 1342 aa3.16□□□□□ -1.9
TOPBP1-206ENST00000508524 ABCA2Q9BZC7 2435 aa3.15□□□□□ -1.9
TOPBP1-206ENST00000508524 MACROD2A1Z1Q3 448 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 DHRS7CA6NNS2 312 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 E9PLD3 99 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 IMPA2O14732 288 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 TM9SF1O15321 606 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 GPX5O75715 221 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 GABRR1P24046 479 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 SLC11A1P49279 550 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 C17orf67Q0P5P2 114 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 ZP4Q12836 540 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 DAZ2Q13117 558 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 KCNJ11Q14654 390 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 MORF4L2Q15014 288 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 DCST2Q5T1A1 773 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 OR5M10Q6IEU7 315 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 SULT1C3Q6IMI6 304 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 IYDQ6PHW0 289 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 DLEU7Q6UYE1 221 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 PPP1R27Q86WC6 154 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 NEIL2Q969S2 332 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 PSMG2Q969U7 264 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 SLC35E1Q96K37 410 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 TBX15Q96SF7 602 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 NDUFAF3Q9BU61 184 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 TMEM9BQ9NQ34 198 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 DAZ3Q9NR90 486 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 DUS2Q9NX74 493 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 GINS2Q9Y248 185 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 CCDC168Q8NDH2 2452 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 CCDC171Q6TFL3 1326 aa3.15□□□□□ -1.91
TOPBP1-206ENST00000508524 FBN1P35555 2871 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 PTPRBP23467 1997 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 GSTTP1A0A1W2PQM5 241 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 TMEM89A2RUT3 159 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 FBLL1A6NHQ2 334 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 TCP11X1B4DZS4 312 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 GOLGA8HP0CJ92 632 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 PDHBP11177 359 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 BCKDHBP21953 392 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 HOXA6P31267 233 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 MAGEA4P43358 317 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 PPOXP50336 477 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 CASP9P55211 416 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 TLE4Q04727 773 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 NME3Q13232 169 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 DPYSL3Q14195 570 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 ZSWIM7Q19AV6 140 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 EOGTQ5NDL2 527 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 BEND6Q5SZJ8 279 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 ECHDC2Q86YB7 292 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 UNC45BQ8IWX7 931 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 CCDC170Q8IYT3 715 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 TMEM80Q96HE8 168 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 VPS39Q96JC1 886 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 SMIM14Q96QK8 99 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 MARCH5Q9NX47 278 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 ANKMY1Q9P2S6 941 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 PPIAL4AQ9Y536 164 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 HIVEP3Q5T1R4 2406 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 KNL1Q8NG31 2342 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 MAP1AP78559 2803 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 NUP205Q92621 2012 aa3.14□□□□□ -1.91
TOPBP1-206ENST00000508524 KNTC1P50748 2209 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 DCHS2Q6V1P9 2916 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 RP1L1Q8IWN7 2480 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 CACNA1DQ01668 2161 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 IGLV3-16A0A075B6K0 115 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 MAGEB4O15481 346 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 ADAM12O43184 909 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 TBL1XO60907 577 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 SURF6O75683 361 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 SCRG1O75711 98 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 CD55P08174 381 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 GNSP15586 552 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 CDH5P33151 784 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 CLDN6P56747 220 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 LINC00315P59091 139 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 SSTP61278 116 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 CDC37Q16543 378 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 ZNF630Q2M218 657 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 PARP6Q2NL67 630 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 ASPHD2Q6ICH7 369 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 GOLGA7Q7Z5G4 137 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 DCAF4L2Q8NA75 395 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 FAM3CQ92520 227 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 PHYHIPQ92561 330 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 FGGYQ96C11 551 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 SPRR3Q9UBC9 169 aa3.13□□□□□ -1.91
TOPBP1-206ENST00000508524 PCDH15Q96QU1 1955 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 TSC2P49815 1807 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 A0A0U1RRA0 63 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 CCL16O15467 120 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 ECI2O75521 394 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms