RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TMEM44Q2T9K0 475 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 GXYLT1Q4G148 440 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 UBXN11Q5T124 520 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 DHRS7BQ6IAN0 325 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 GDF6Q6KF10 455 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TAPT1Q6NXT6 567 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 FAM111BQ6SJ93 734 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CD163Q86VB7 1156 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 THOC6Q86W42 341 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TEX26Q8N6G2 289 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ACBD7Q8N6N7 88 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM255BQ8WV15 326 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 C16orf58Q96GQ5 468 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM68Q96MH6 324 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF587Q96SQ5 575 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SEPT5Q99719 369 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 C16orf70Q9BSU1 422 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 RIOK2Q9BVS4 552 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CDCA7Q9BWT1 371 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TSPAN10Q9H1Z9 355 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC38A1Q9H2H9 487 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ZDHHC8Q9ULC8 765 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CBLCQ9ULV8 474 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 EXOSC1Q9Y3B2 195 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 DOCK8Q8NF50 2099 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 A0A1B0GVT2 93 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 IFITM10A6NMD0 228 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TNFRSF10BO14763 440 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC31A2O15432 143 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SC5DO75845 299 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 KRT33AO76009 404 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC16A8O95907 504 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TBX6O95947 436 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SFTA3P0C7M3 94 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 GTF2F2P13984 249 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ITPKBP27987 946 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TRHRP34981 398 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF33AQ06730 810 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ARHGAP1Q07960 439 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TAF10Q12962 218 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 EIF2B1Q14232 305 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 RSU1Q15404 277 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TCEA2Q15560 299 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 MICBQ29980 383 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ARHGAP11AQ6P4F7 1023 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 MOB3CQ70IA8 216 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CXXC5Q7LFL8 322 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 VRK2Q86Y07 508 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 APCDD1LQ8NCL9 501 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 OR4C16Q8NGL9 310 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 RAD51AP1Q96B01 352 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 DPH1Q9BZG8 443 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 GPR61Q9BZJ8 451 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 RIMS4Q9H426 269 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 POFUT1Q9H488 388 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 FN3KRPQ9HA64 309 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ZFYVE1Q9HBF4 777 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ISYNA1Q9NPH2 558 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 NOX4Q9NPH5 578 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SEMA4GQ9NTN9 838 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TAS2R5Q9NYW4 299 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 MBD2Q9UBB5 411 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF282Q9UDV7 671 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 RUVBL1Q9Y265 456 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 AMDHD2Q9Y303 409 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 A0A1B0GUH1 482 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 A6NNC1 897 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 FAAHO00519 579 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 GAPDHSO14556 408 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 FLRT2O43155 660 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CYTIPO60759 359 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ERAL1O75616 437 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 OR2A4O95047 310 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 IGLV3-25P01717 112 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ATP1B1P05026 303 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 PGAM2P15259 253 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 PNPLA4P41247 253 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 P2RX1P51575 399 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CDK5Q00535 292 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SCN5AQ14524 2016 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 KRT33BQ14525 404 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 AGERQ15109 404 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 OR8G1Q15617 311 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 LDLRAD1Q5T700 205 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 JMJD6Q6NYC1 403 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CDC73Q6P1J9 531 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ZC3H14Q6PJT7 736 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 RNF165Q6ZSG1 346 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 STEAP2Q8NFT2 490 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 STOML3Q8TAV4 291 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 CD300LFQ8TDQ1 290 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 SMIM4Q8WVI0 70 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 PPP1R1CQ8WVI7 109 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TCTEX1D2Q8WW35 142 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 WBP2Q969T9 261 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 BSCL2Q96G97 398 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 IL17FQ96PD4 163 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 OR2A7Q96R45 310 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 ULBP3Q9BZM4 244 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms