RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 OR2T29Q8NH02 315 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 PRR7Q8TB68 274 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 HIST1H2ACQ93077 130 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 WNT2BQ93097 391 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 ZFP3Q96NJ6 502 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 TUBA1CQ9BQE3 449 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 OR11A1Q9GZK7 315 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 C6orf203Q9P0P8 240 aaPredicted RBP18.03■□□□□ 0.48
USP53-203ENST00000507597 TMEM5Q9Y2B1 443 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 TESMINQ9Y4I5 508 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 CORINQ9Y5Q5 1042 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 PCNX3Q9H6A9 2034 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 A0A1W2PNR3 127 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 SLC22A20A6NK97 555 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 CLCA1A8K7I4 914 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 CXCL13O43927 109 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 NPIPB7O75200 414 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 FKBP6O75344 327 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 DEAF1O75398 565 aaPredicted RBP18.02■□□□□ 0.48
USP53-203ENST00000507597 IL2RAP01589 272 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 MT-ND1P03886 318 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 GNLYP22749 145 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 RRM2P31350 389 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 KPNB1Q14974 876 aaKnown RBP18.02■□□□□ 0.48
USP53-203ENST00000507597 CTU2Q2VPK5 515 aaKnown RBP18.02■□□□□ 0.48
USP53-203ENST00000507597 ACSF3Q4G176 576 aaPredicted RBP18.02■□□□□ 0.48
USP53-203ENST00000507597 STMN2Q93045 179 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 ARL5BQ96KC2 179 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 ZNF426Q9BUY5 554 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 ASPNQ9BXN1 380 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 GLRX2Q9NS18 164 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 ARMC1Q9NVT9 282 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 RHCGQ9UBD6 479 aa18.02■□□□□ 0.48
USP53-203ENST00000507597 ZFYVE26Q68DK2 2539 aa18.02■□□□□ 0.47
USP53-203ENST00000507597 FREM3P0C091 2139 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 TNFRSF11BO00300 401 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 FFAR1O14842 300 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 SEMA7AO75326 666 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 DIRAS1O95057 198 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 PRSS23O95084 383 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 THY1P04216 161 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 FASP25445 335 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 RPS5P46782 204 aaKnown RBP18.01■□□□□ 0.47
USP53-203ENST00000507597 CCNIQ14094 377 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 PON3Q15166 354 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 RNPS1Q15287 305 aaKnown RBP18.01■□□□□ 0.47
USP53-203ENST00000507597 OR7A5Q15622 319 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 EMC4Q5J8M3 183 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 MBOAT2Q6ZWT7 520 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 MAMDC2Q7Z304 686 aaPredicted RBP18.01■□□□□ 0.47
USP53-203ENST00000507597 NKAIN4Q8IVV8 208 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 PIGXQ8TBF5 258 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 RELTQ969Z4 430 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 DHRS1Q96LJ7 313 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 PRSS27Q9BQR3 290 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 TACO1Q9BSH4 297 aaKnown RBP18.01■□□□□ 0.47
USP53-203ENST00000507597 BDH2Q9BUT1 245 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 SH3BGRL2Q9UJC5 107 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 TINAGQ9UJW2 476 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 BSNQ9UPA5 3926 aa18.01■□□□□ 0.47
USP53-203ENST00000507597 LIPT2A6NK58 231 aa18■□□□□ 0.47
USP53-203ENST00000507597 CCL21O00585 134 aa18■□□□□ 0.47
USP53-203ENST00000507597 VAMP5O95183 116 aa18■□□□□ 0.47
USP53-203ENST00000507597 LYPD3O95274 346 aa18■□□□□ 0.47
USP53-203ENST00000507597 FPR1P21462 350 aa18■□□□□ 0.47
USP53-203ENST00000507597 SHC1P29353 583 aa18■□□□□ 0.47
USP53-203ENST00000507597 TIMP3P35625 211 aa18■□□□□ 0.47
USP53-203ENST00000507597 AGFG1P52594 562 aaKnown RBP18■□□□□ 0.47
USP53-203ENST00000507597 HMGA2P52926 109 aa18■□□□□ 0.47
USP53-203ENST00000507597 EGR4Q05215 589 aa18■□□□□ 0.47
USP53-203ENST00000507597 FOXD4Q12950 439 aaPredicted RBP18■□□□□ 0.47
USP53-203ENST00000507597 IQCCQ4KMZ1 466 aa18■□□□□ 0.47
USP53-203ENST00000507597 C4orf17Q53FE4 359 aa18■□□□□ 0.47
USP53-203ENST00000507597 PAQR6Q6TCH4 344 aa18■□□□□ 0.47
USP53-203ENST00000507597 ADGRE4PQ86SQ3 457 aa18■□□□□ 0.47
USP53-203ENST00000507597 TMEM255BQ8WV15 326 aa18■□□□□ 0.47
USP53-203ENST00000507597 SLC25A36Q96CQ1 311 aa18■□□□□ 0.47
USP53-203ENST00000507597 KTI12Q96EK9 354 aaPredicted RBP18■□□□□ 0.47
USP53-203ENST00000507597 SGTBQ96EQ0 304 aa18■□□□□ 0.47
USP53-203ENST00000507597 ALPK1Q96QP1 1244 aa18■□□□□ 0.47
USP53-203ENST00000507597 NDEL1Q9GZM8 345 aa18■□□□□ 0.47
USP53-203ENST00000507597 COQ10BQ9H8M1 238 aa18■□□□□ 0.47
USP53-203ENST00000507597 FKRPQ9H9S5 495 aa18■□□□□ 0.47
USP53-203ENST00000507597 NANSQ9NR45 359 aa18■□□□□ 0.47
USP53-203ENST00000507597 KLHL9Q9P2J3 617 aa18■□□□□ 0.47
USP53-203ENST00000507597 DNAJB9Q9UBS3 223 aa18■□□□□ 0.47
USP53-203ENST00000507597 MEMO1Q9Y316 297 aa18■□□□□ 0.47
USP53-203ENST00000507597 ZNF407Q9C0G0 2248 aa18■□□□□ 0.47
USP53-203ENST00000507597 DNAJC13O75165 2243 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 BAHCC1Q9P281 2608 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 ZC3H12DA2A288 527 aaKnown RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 HSPB2A8KAH6 182 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 H0YC42 278 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 OR6A2O95222 327 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 PLGP00747 810 aaPredicted RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 LDLRP01130 860 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 CRHP06850 196 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 ERFP50548 548 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 TPD52P55327 224 aaPredicted RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 HSPB2Q16082 182 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms