RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CEP55Q53EZ4 464 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 EOGTQ5NDL2 527 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 OTPQ5XKR4 325 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 OR52E8Q6IFG1 317 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 TRIM69Q86WT6 500 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 ZNF100Q8IYN0 542 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 RDH10Q8IZV5 341 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 NKAPP1Q8N9T2 125 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 BHLHE23Q8NDY6 225 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 OR52H1Q8NGJ2 320 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 TIMD4Q96H15 378 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 IMMP1LQ96LU5 166 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 ZIM3Q96PE6 472 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 CCT7Q99832 543 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 C20orf85Q9H1P6 137 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 MCCC2Q9HCC0 563 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 SH2D2AQ9NP31 389 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 POLE4Q9NR33 117 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 ABCB10Q9NRK6 738 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 C6orf203Q9P0P8 240 aaPredicted RBP2.36□□□□□ -2.03
LSM6-205ENST00000507449 NAP1L2Q9ULW6 460 aaPredicted RBP2.36□□□□□ -2.03
LSM6-205ENST00000507449 IFT52Q9Y366 437 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 RPAP1Q9BWH6 1393 aaPredicted RBP2.36□□□□□ -2.03
LSM6-205ENST00000507449 ZNF318Q5VUA4 2279 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CHD4Q14839 1912 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 IGHV3OR16-13A0A075B7E8 117 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 TCRBV9S1A1TA0A576 114 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 HSD17B6O14756 317 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 TIMM8AO60220 97 aaPredicted RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 ZNF861PO60384 105 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 FCMRO60667 390 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 HSMCR30P0CW71 290 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 DBTP11182 482 aaKnown RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 ATP6V1B2P21281 511 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CXCR2P25025 360 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 GNA11P29992 359 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CALCRP30988 508 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CCR1P32246 355 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 SHMT2P34897 504 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CRYBB1P53674 252 aaPredicted RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 PKNOX1P55347 436 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 SEC61GP60059 68 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CDK16Q00536 496 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 PSG7Q13046 419 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 RIPK1Q13546 671 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 C1orf146Q5VVC0 180 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 PGAP1Q75T13 922 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 EFL1Q7Z2Z2 1120 aaKnown RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 CCDC50Q8IVM0 306 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 PRR22Q8IZ63 422 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 ZNF740Q8NDX6 193 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 OR2L5Q8NG80 312 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 MAGEE2Q8TD90 523 aaPredicted RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 BRSK1Q8TDC3 778 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 CMTM7Q96FZ5 175 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 PAGE5Q96GU1 130 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 TSG101Q99816 390 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 MRPL45Q9BRJ2 306 aaKnown RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 RAB34Q9BZG1 259 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 RBKSQ9H477 322 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 REEP4Q9H6H4 257 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 LRRC40Q9H9A6 602 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 FN3KRPQ9HA64 309 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 FOLH1BQ9HBA9 442 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 PDFQ9HBH1 243 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 DAZ3Q9NR90 486 aaKnown RBP2.35□□□□□ -2.03
LSM6-205ENST00000507449 AIG1Q9NVV5 245 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 TREM2Q9NZC2 230 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 PIGLQ9Y2B2 252 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 V9GY05 133 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 MEGF6O75095 1541 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 SH3TC1Q8TE82 1336 aa2.35□□□□□ -2.03
LSM6-205ENST00000507449 A6NIZ1 184 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 USP27XA6NNY8 438 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 MED7O43513 233 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 TRAF3IP2O43734 574 aaPredicted RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 B4GALT2O60909 372 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 SNAPINO95295 136 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 TSPAN12O95859 305 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 ACTL6AO96019 429 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 GAPDHP04406 335 aaKnown RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 ANXA13P27216 316 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 RDXP35241 583 aaKnown RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 OPRD1P41143 372 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 GSSP48637 474 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 RAP1BP61224 184 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 TGFBR3Q03167 851 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 TLE4Q04727 773 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 OXA1LQ15070 435 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 C1orf100Q5SVJ3 147 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 KRTAP11-1Q8IUC1 163 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 FTMTQ8N4E7 242 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 C20orf203Q8NBC4 194 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 OR1L4Q8NGR5 311 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 NEIL3Q8TAT5 605 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 SETD7Q8WTS6 366 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms