RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 NR2F1P10589 423 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 IL7RP16871 459 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC1A3P43003 542 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 FABP6P51161 128 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 TXNL4AP83876 142 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC25A3Q00325 362 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 EPS8Q12929 822 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 GNA13Q14344 377 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 CEP85LQ5SZL2 805 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 TSPO2Q5TGU0 170 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 OR7E24Q6IFN5 339 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF621Q6ZSS3 439 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 SPATA19Q7Z5L4 167 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 DEPDC4Q8N2C3 294 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 MUC15Q8N387 334 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 ANKRD42Q8N9B4 389 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 C1orf162Q8NEQ5 155 aaPredicted RBP10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 HTRA1Q92743 480 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 PMM1Q92871 262 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 ZBTB18Q99592 522 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 PAIP2Q9BPZ3 127 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 AMBRA1Q9C0C7 1298 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 UPB1Q9UBR1 384 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 DCTN4Q9UJW0 460 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 GPR45Q9Y5Y3 372 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 ATP23Q9Y6H3 246 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 A0A096LNT2 108 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 CFAP73A6NFT4 308 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 GPRIN2O60269 458 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 UQCRBP14927 111 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 CEACAM7Q14002 265 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC17A1Q14916 467 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 OR7A5Q15622 319 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 MAPK11Q15759 364 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 TNFAIP8L3Q5GJ75 292 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 OTUD3Q5T2D3 398 aaPredicted RBP10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 HHATQ5VTY9 493 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 HMBOX1Q6NT76 420 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 PAQR6Q6TCH4 344 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 CLEC2AQ6UVW9 174 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 PEX5LQ8IYB4 626 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 C17orf78Q8N4C9 275 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 TMEM99Q8N816 258 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 OR10H5Q8NGA6 315 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 PARD6BQ9BYG5 372 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 WDR55Q9H6Y2 383 aaPredicted RBP10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 MTHFD2LQ9H903 347 aaPredicted RBP10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC17A5Q9NRA2 495 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 PARPBPQ9NWS1 579 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 AMDHD2Q9Y303 409 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 ALPK2Q86TB3 2170 aa10.12□□□□□ -0.79
HMGCS1-204ENST00000507293 ANK3Q12955 4377 aaKnown RBP10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 FAM234BA2RU67 622 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 CDHR4A6H8M9 788 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 RFXANKO14593 260 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 AKR7A3O95154 331 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 KRT75O95678 551 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 GKN3PP0CG01 181 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 EPHA3P29320 983 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 MAP2K6P52564 334 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 DSCR9P59020 149 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 LRRC74AQ0VAA2 488 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 RAB35Q15286 201 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF544Q6NX49 715 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF836Q6ZNA1 936 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 AAED1Q7RTV5 226 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 VRK2Q86Y07 508 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 HIPK1Q86Z02 1210 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF440Q8IYI8 595 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 CADM2Q8N3J6 435 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF525Q8N782 197 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 OR9K2Q8NGE7 335 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 OR52P1PQ8NH57 321 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 TMEM45BQ96B21 275 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF385AQ96PM9 386 aaKnown RBP10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ADAM19Q9H013 955 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 FKRPQ9H9S5 495 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC6A13Q9NSD5 602 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 RLIMQ9NVW2 624 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 P2RX2Q9UBL9 471 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 ARFGEF3Q5TH69 2177 aa10.11□□□□□ -0.79
HMGCS1-204ENST00000507293 DSPPQ9NZW4 1301 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 LIPT2A6NK58 231 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 AQP7P3A6NL99 342 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 TRPC5OSA6NMA1 111 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 A8MV72 311 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 ATP6V1G2-DDX39BF2Z307 99 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 H7C417 338 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 HDAC3O15379 428 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 BCHEP06276 602 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 GPIP06744 558 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 KITP10721 976 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 ETFAP13804 333 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 CDH2P19022 906 aaPredicted RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 CXCR1P25024 350 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 MPGP29372 298 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 MVDP53602 400 aa10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
HMGCS1-204ENST00000507293 PRPS1P60891 318 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms