RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 PPIEQ9UNP9 301 aaKnown RBP20.24■□□□□ 0.83
RNF4-207ENST00000506706 HIF3AQ9Y2N7 669 aa20.24■□□□□ 0.83
RNF4-207ENST00000506706 NPFFR2Q9Y5X5 522 aa20.24■□□□□ 0.83
RNF4-207ENST00000506706 MYO15AQ9UKN7 3530 aa20.24■□□□□ 0.83
RNF4-207ENST00000506706 ASCC3Q8N3C0 2202 aaKnown RBP20.24■□□□□ 0.83
RNF4-207ENST00000506706 TRDV1A0A1B0GX56 115 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 D6RAR5 112 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 BLOC1S5-TXNDC5H3BN57 136 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 KHNYNO15037 678 aaKnown RBP20.23■□□□□ 0.83
RNF4-207ENST00000506706 LRRTM2O43300 516 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 SCO2O43819 266 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 FGF5P12034 268 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 FGF9P31371 208 aaPredicted RBP20.23■□□□□ 0.83
RNF4-207ENST00000506706 FABP5Q01469 135 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 ZNF45Q02386 682 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 IL11RAQ14626 422 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 PAPD4Q6PIY7 484 aaKnown RBP20.23■□□□□ 0.83
RNF4-207ENST00000506706 NUP54Q7Z3B4 507 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 TMEM105Q8N8V8 129 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 DTWD2Q8NBA8 298 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 ATP6V1C2Q8NEY4 427 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 SMPDL3BQ92485 455 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 MOGAT1Q96PD6 335 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 COQ7Q99807 217 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 MESP1Q9BRJ9 268 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 BARHL1Q9BZE3 327 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 BABAM2Q9NXR7 383 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 TECTAO75443 2155 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 NTN3O00634 580 aaPredicted RBP20.23■□□□□ 0.83
RNF4-207ENST00000506706 CDC40O60508 579 aaKnown RBP eCLIP20.23■□□□□ 0.831e-6■□□□□ 8.2
RNF4-207ENST00000506706 CXCR1P25024 350 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 EFR3AQ14156 821 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 DCDC5Q6ZRR9 648 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 CENPSQ8N2Z9 138 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 MOSPD2Q8NHP6 518 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 NUBPLQ8TB37 319 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 NECAB3Q96P71 396 aaPredicted RBP20.23■□□□□ 0.83
RNF4-207ENST00000506706 TIMP4Q99727 224 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 CTRCQ99895 268 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 KATNB1Q9BVA0 655 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 SLC26A1Q9H2B4 701 aa20.23■□□□□ 0.83
RNF4-207ENST00000506706 GP1BBP13224 206 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 AQP2P41181 271 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 P2RX1P51575 399 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 ERVK-25P63136 954 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 ACTC1P68032 377 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 ACTA1P68133 377 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 TRA2AQ13595 282 aaKnown RBP eCLIP20.22■□□□□ 0.83
RNF4-207ENST00000506706 ATP1A4Q13733 1029 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 TOMM34Q15785 309 aaPredicted RBP20.22■□□□□ 0.83
RNF4-207ENST00000506706 KTI12Q96EK9 354 aaPredicted RBP20.22■□□□□ 0.83
RNF4-207ENST00000506706 SPSB2Q99619 263 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 LPAR4Q99677 370 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 MED18Q9BUE0 208 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 CRB3Q9BUF7 120 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 KLHL1Q9NR64 748 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 ASB6Q9NWX5 421 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 SLC6A5Q9Y345 797 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 C17orf51A8MQB3 221 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 MEN1O00255 615 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 MAGEB3O15480 346 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 HLA-DPB1P04440 258 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 ASAH2BP0C7U1 165 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 RUNX1T1Q06455 604 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 LGALS3BPQ08380 585 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 GPR50Q13585 617 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 C11orf91Q3C1V1 193 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 LCN1P1Q5VSP4 162 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 CPEB2Q7Z5Q1 589 aaKnown RBP20.22■□□□□ 0.83
RNF4-207ENST00000506706 NPEPL1Q8NDH3 523 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 SLC25A46Q96AG3 418 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 COX4I2Q96KJ9 171 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 TMED9Q9BVK6 235 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 SMURF1Q9HCE7 757 aa20.22■□□□□ 0.83
RNF4-207ENST00000506706 VCANP13611 3396 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 CPNE3O75131 537 aaKnown RBP20.21■□□□□ 0.83
RNF4-207ENST00000506706 MT-ND5P03915 603 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 IFITM3Q01628 133 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 MXD1Q05195 221 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 LTBQ06643 244 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 LCN10Q6JVE6 187 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 C16orf47Q6ZP98 133 aaPredicted RBP20.21■□□□□ 0.83
RNF4-207ENST00000506706 NMNAT3Q96T66 252 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 WDR77Q9BQA1 342 aaPredicted RBP20.21■□□□□ 0.83
RNF4-207ENST00000506706 TPK1Q9H3S4 243 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 TRIM36Q9NQ86 728 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 GALNT8Q9NY28 637 aa20.21■□□□□ 0.83
RNF4-207ENST00000506706 C19orf25Q9UFG5 118 aaPredicted RBP20.21■□□□□ 0.83
RNF4-207ENST00000506706 ETV6P41212 452 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 SLC26A5P58743 744 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 TBC1D25Q3MII6 688 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 ALG10Q5BKT4 473 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 SNX29P2Q8IUI4 249 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 MISPQ8IVT2 679 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 GPALPP1Q8IXQ4 340 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 ARIH2OSQ8N7S6 290 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 THAP3Q8WTV1 239 aaPredicted RBP20.2■□□□□ 0.82
RNF4-207ENST00000506706 RASD2Q96D21 266 aa20.2■□□□□ 0.82
RNF4-207ENST00000506706 ZMYND19Q96E35 227 aaPredicted RBP20.2■□□□□ 0.82
RNF4-207ENST00000506706 CEP19Q96LK0 163 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms