RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 RNF185Q96GF1 192 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 TIMD4Q96H15 378 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 C16orf45Q96MC5 204 aaPredicted RBP1.75□□□□□ -2.13
GYPB-207ENST00000506679 TGM7Q96PF1 710 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 P2RY13Q9BPV8 354 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 RASL11BQ9BPW5 248 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 EDEM2Q9BV94 578 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 TPPP3Q9BW30 176 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 VCPKMTQ9H867 229 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 FOLH1BQ9HBA9 442 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 PLGRKTQ9HBL7 147 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 POPDC2Q9HBU9 364 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 PIPOXQ9P0Z9 390 aa1.75□□□□□ -2.13
GYPB-207ENST00000506679 ASTN1O14525 1302 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 IGLV3-16A0A075B6K0 115 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 A0A0G2JLM5 398 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 A6NDX4 124 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 N4BP1O75113 896 aaKnown RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 PCCAP05165 728 aaPredicted RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 HEXBP07686 556 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 HSPA5P11021 654 aaKnown RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 PNMTP11086 282 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 ICAM2P13598 275 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 IMPDH1P20839 514 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 CXCR2P25025 360 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 LAP3P28838 519 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 OTX2P32243 289 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 SHMT2P34897 504 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 CSNK1DP48730 415 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 SH3BGRP55822 239 aaPredicted RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 TNFRSF17Q02223 184 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 SNTB2Q13425 540 aaKnown RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 VGLL4Q14135 290 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 SLC15A2Q16348 729 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 PDK4Q16654 411 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 NRF1Q16656 503 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 KCTD19Q17RG1 926 aaPredicted RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 PARP15Q460N3 678 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 NADK2Q4G0N4 442 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 BCL7AQ4VC05 210 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 TTC23Q5W5X9 447 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 CES3Q6UWW8 571 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 SLC38A6Q8IZM9 456 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 ZNF786Q8N393 782 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 FTMTQ8N4E7 242 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 ATP6V0D2Q8N8Y2 350 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 Q8N9W7 124 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 OR6C4Q8NGE1 309 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 MARCH1Q8TCQ1 289 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 PAGE5Q96GU1 130 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 SEC22AQ96IW7 307 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 POLR1EQ9GZS1 481 aaKnown RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 RAB33BQ9H082 229 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 DEFB127Q9H1M4 99 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 EML4Q9HC35 981 aaKnown RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.74□□□□□ -2.13
GYPB-207ENST00000506679 STAP1Q9ULZ2 295 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 PRPF19Q9UMS4 504 aaKnown RBP1.74□□□□□ -2.13
GYPB-207ENST00000506679 RPH3ALQ9UNE2 315 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 POLDIP2Q9Y2S7 368 aa1.74□□□□□ -2.13
GYPB-207ENST00000506679 PLEKHH1Q9ULM0 1364 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 PIKFYVEQ9Y2I7 2098 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 TET2Q6N021 2002 aaPredicted RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 PRRG1O14668 218 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 PRKAB2O43741 272 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 PFKFB2O60825 505 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 PEX11AO75192 247 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 KLF8O95600 359 aaPredicted RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 PTMAP06454 111 aaKnown RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 TDGF1P13385 188 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 HNF1AP20823 631 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 ATP6V1B2P21281 511 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 CCNCP24863 283 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 SOX6P35712 828 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 CHI3L1P36222 383 aaPredicted RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 DDOSTP39656 456 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 TDGF1P3P51864 188 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 CRISP3P54108 245 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 POLR2FP61218 127 aaKnown RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 CBX1P83916 185 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 MAP2K1Q02750 393 aaPredicted RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 LRRC63Q05C16 580 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 GANABQ14697 944 aaKnown RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 CARD16Q5EG05 197 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 TMEM255AQ5JRV8 349 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 C10orf120Q5SQS8 335 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 KCNIP4Q6PIL6 250 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 C6orf89Q6UWU4 347 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 TMIGD1Q6UXZ0 262 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 MFSD6LQ8IWD5 586 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 OR4K14Q8NGD5 310 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 OR51G1Q8NGK1 321 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 OR6X1Q8NH79 312 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 PIGCQ92535 297 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 ARPC1AQ92747 370 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 FCRL1Q96LA6 429 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 SENP8Q96LD8 212 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 RIBC2Q9H4K1 309 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 RAB18Q9NP72 206 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms