RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZDHHC21Q8IVQ6 265 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 WDFY1Q8IWB7 410 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 DDIT4LQ96D03 193 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 KTI12Q96EK9 354 aaPredicted RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 GPA33Q99795 319 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 PRR14Q9BWN1 585 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 TP63Q9H3D4 680 aaPredicted RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 RPL36A-HNRNPH2H7BZ11 118 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 GTPBP1O00178 669 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR7A10O76100 309 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR1E2P47887 323 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC17A1Q14916 467 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 MICAQ29983 383 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 ALG10BQ5I7T1 473 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 PARP8Q8N3A8 854 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 ARL5BQ96KC2 179 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 S100A14Q9HCY8 104 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 DNAJB9Q9UBS3 223 aa7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 FOXD3Q9UJU5 478 aaPredicted RBP7.4□□□□□ -1.22
CDC42SE2-208ENST00000505065 TRBV4-1A0A0J9YWV2 114 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 SHISA8B8ZZ34 492 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 DLGAP1O14490 977 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 PLPP3O14495 311 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 MGRN1O60291 552 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 NTF4P34130 210 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 PPP2R2BQ00005 443 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 GXYLT1Q4G148 440 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 LRRC23Q53EV4 343 aaPredicted RBP7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 C1QL3Q5VWW1 255 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR5M10Q6IEU7 315 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR2T5Q6IEZ7 315 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 PGBD2Q6P3X8 592 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM123Q8N131 208 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR2T29Q8NH02 315 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF519Q8TB69 540 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM255BQ8WV15 326 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 PRM3Q9NNZ6 103 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 C20orf141Q9NUB4 165 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEFF2Q9UIK5 374 aaPredicted RBP7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 SLC6A5Q9Y345 797 aa7.4□□□□□ -1.23
CDC42SE2-208ENST00000505065 IMPA2O14732 288 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 ATXN8OSP0DMR3 200 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 APEHP13798 732 aaKnown RBP7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 HOXC5Q00444 222 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 PIN1Q13526 163 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 KPNB1Q14974 876 aaKnown RBP7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 TAF11Q15544 211 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 SGCBQ16585 318 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 FAM69AQ5T7M9 428 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 KDM4DQ6B0I6 523 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 PODNL1Q6PEZ8 512 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM239Q8WW34 195 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 TTYH2Q9BSA4 534 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 CHID1Q9BWS9 393 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 GABARAPL3Q9BY60 117 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 LINC00470Q9BZP3 86 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 MCCC2Q9HCC0 563 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 PLSCR4Q9NRQ2 329 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 GTF3C1Q12789 2109 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 CLCA1A8K7I4 914 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 GSTA4O15217 222 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 SLC19A2O60779 497 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 HPRP00739 348 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 HPGDP15428 266 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 MAKP20794 623 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 DIO1P49895 249 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 HSF1Q00613 529 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 SEZ6L2Q6UXD5 910 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR10D3Q8NH80 312 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 MRPL13Q9BYD1 178 aaKnown RBP7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM27Q9HBJ8 222 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 CORINQ9Y5Q5 1042 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 COL6A6A6NMZ7 2263 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 SEC14L5O43304 696 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 CD8BP10966 210 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 RFC3P40938 356 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 SMIM11AP58511 58 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 ELF3P78545 371 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 MFSD13AQ14CX5 517 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM54Q969K7 222 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 LRR1Q96L50 414 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 MOGAT1Q96PD6 335 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 DEFB127Q9H1M4 99 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 RASD1Q9Y272 281 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 SIGLEC7Q9Y286 467 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 B3GALT5Q9Y2C3 310 aa7.39□□□□□ -1.23
CDC42SE2-208ENST00000505065 TRAF3IP2O43734 574 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 AHCYL1O43865 530 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 H1F0P07305 194 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 FCGR1AP12314 374 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 COX5AP20674 150 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 PTGS2P35354 604 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 SLC35A1P78382 337 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 LSM11P83369 360 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 PLGLB1Q02325 96 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 TLE1Q04724 770 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 NFATC3Q12968 1075 aa7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 RNPS1Q15287 305 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZER1Q7Z7L7 766 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms