RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CHRDQ9H2X0 955 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ICOSLGO75144 302 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 DPP4P27487 766 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 CRABP1P29762 137 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 SSR4P51571 173 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 OTPQ5XKR4 325 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF517Q6ZMY9 492 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ESX1Q8N693 406 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 PJA1Q8NG27 643 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 OR13F1Q8NGS4 319 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ALG12Q9BV10 488 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ACAD8Q9UKU7 415 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 WDPCPO95876 746 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 HOXC4P09017 264 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 PPICP45877 212 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF782Q6ZMW2 699 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ANKRD13BQ86YJ7 626 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 SERPINA12Q8IW75 414 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 OR13C3Q8NGS6 347 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF160Q9HCG1 818 aa12.98□□□□□ -0.33
TCOF1-207ENST00000504761 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 DSCR3O14972 297 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 PGAM2P15259 253 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 EMDP50402 254 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 QSOX2Q6ZRP7 698 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 PMM1Q92871 262 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 C7orf34Q96L11 122 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 ATG5Q9H1Y0 275 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GPN1Q9HCN4 374 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 SACM1LQ9NTJ5 587 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GPATCH2Q9NW75 528 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 HNRNPFP52597 415 aaKnown RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 SYT14P1Q58G82 188 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 C1orf210Q8IVY1 113 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 ARMC10Q8N2F6 343 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 SMAP2Q8WU79 429 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 VWCEQ96DN2 955 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 NXT1Q9UKK6 140 aaKnown RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GPR55Q9Y2T6 319 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF878C9JN71 531 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 TMX2-CTNND1H3BSU7 103 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 TPD52L2O43399 206 aaKnown RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 THBS1P07996 1170 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GSTT2BP0CG30 244 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 POLR2HP52434 150 aaKnown RBP12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GMFBP60983 142 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 SLC35A2P78381 396 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 C4orf46Q504U0 113 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 TMEM69Q5SWH9 247 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GPR32P1Q8NGA4 272 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 OR1J4Q8NGS1 313 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 FUZQ9BT04 418 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 GREB1Q4ZG55 1949 aa12.97□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 A0A087WV62 115 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 A0A1B0GW55 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF208O43345 1280 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4L2P0CJ85 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4L3P0CJ86 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4L4P0CJ87 422 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4L5P0CJ88 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4L6P0CJ89 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4L7P0CJ90 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-207ENST00000504761 HTR3AP46098 478 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DAP3P51398 398 aaKnown RBP12.96□□□□□ -0.33
TCOF1-207ENST00000504761 TRAM1Q15629 374 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 COL28A1Q2UY09 1125 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DHRS4L2Q6PKH6 230 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 EMC6Q9BV81 110 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 ABCG5Q9H222 651 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 DUX4Q9UBX2 424 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 NCR1O76036 304 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 KDM4BO94953 1096 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 CT62P0C5K7 136 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 CDK4P11802 303 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 POU3F4P49335 361 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 MVB12AQ96EY5 273 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 HINT3Q9NQE9 182 aaKnown RBP12.96□□□□□ -0.33
TCOF1-207ENST00000504761 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-207ENST00000504761 PLEK2Q9NYT0 353 aa12.96□□□□□ -0.33
TCOF1-207ENST00000504761 ACOT7O00154 380 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.34
TCOF1-207ENST00000504761 PEBP1P30086 187 aaKnown RBP12.96□□□□□ -0.34
TCOF1-207ENST00000504761 SLC22A10Q63ZE4 541 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 OLFML2AQ68BL7 652 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 SLC22A18ASQ8N1D0 253 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 EFEMP2O95967 443 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 CD14P08571 375 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 RPS27P42677 84 aaKnown RBP12.96□□□□□ -0.34
TCOF1-207ENST00000504761 GPR3P46089 330 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 PPP5CP53041 499 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.34
TCOF1-207ENST00000504761 BORAQ6PGQ7 559 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms