RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 LRMDAQ9H2I8 198 aa10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 MCTS1Q9ULC4 181 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-208ENST00000504489 DOPEY1Q5JWR5 2465 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 ZC3H12DA2A288 527 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 SULT2B1O00204 365 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 TOXO94900 526 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 AGFG2O95081 481 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 RCBTB2O95199 551 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 OR5F1O95221 314 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 SYNGR4O95473 234 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 STAMBPO95630 424 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 TGM6O95932 706 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 LDLRP01130 860 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 IL2RAP01589 272 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 THY1P04216 161 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 FCGR2AP12318 317 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 ATP6V1B2P21281 511 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 DIO1P49895 249 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 SMSP52788 366 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 TAS2R41P59536 307 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 CSNK2A1P68400 391 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 EGR4Q05215 589 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 PON3Q15166 354 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 C1orf140Q5VVS0 124 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 CYP2R1Q6VVX0 501 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 NCCRP1Q6ZVX7 275 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 FAM86B1Q8N7N1 296 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 C9orf106Q8NAJ2 232 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 FNDC9Q8TBE3 224 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 MCUR1Q96AQ8 359 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 CCDC124Q96CT7 223 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC41A3Q96GZ6 507 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 C7orf34Q96L11 122 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 SRXN1Q9BYN0 137 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 RIMS3Q9UJD0 308 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 A4GNTQ9UNA3 340 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 ENPP4Q9Y6X5 453 aa10.66□□□□□ -0.7
PDLIM5-208ENST00000504489 LRRK2Q5S007 2527 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 IGKV1D-42A0A075B6H8 117 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 TCRBV5S2A0A599 114 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 HSPB2A8KAH6 182 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 ZG16O60844 167 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 SEMG1P04279 462 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 GPIP06744 558 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 CRHP06850 196 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 IMPDH2P12268 514 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 AGAP20933 346 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 IFNA8P32881 189 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 IDUAP35475 653 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 AGFG1P52594 562 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC35A1P78382 337 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 H3F3AP84243 136 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 PIN1Q13526 163 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 HSPB2Q16082 182 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF239Q16600 458 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 OR2A2Q6IF42 318 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 XKRXQ6PP77 449 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 ASRGL1Q7L266 308 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 P4HA3Q7Z4N8 544 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 GDF7Q7Z4P5 450 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 TSEN54Q7Z6J9 526 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 OR6S1Q8NH40 331 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 RNF217Q8TC41 542 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 ZHX1-C8orf76Q96EF9 292 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 PRSS27Q9BQR3 290 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 PRRG4Q9BZD6 226 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 TRIM15Q9C019 465 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 RNF122Q9H9V4 155 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 COQ3Q9NZJ6 369 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 NDUFAF4Q9P032 175 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 Q9UFV3 132 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC7A7Q9UM01 511 aa10.65□□□□□ -0.7
PDLIM5-208ENST00000504489 LIPT2A6NK58 231 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 AQP12BA6NM10 295 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 FFAR1O14842 300 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 OR2T1O43869 369 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 EIF1BO60739 113 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 FZD7O75084 574 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 AQP8O94778 261 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 PRSS23O95084 383 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 AHSA1O95433 338 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 IL18BPO95998 194 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 ITGA2P17301 1181 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 RHCEP18577 417 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 FPR1P21462 350 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 ENPP1P22413 925 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 CTSSP25774 331 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 RBM34P42696 430 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 OR2B6P58173 313 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 VLDLRP98155 873 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 GABPB1Q06547 395 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 IQCCQ4KMZ1 466 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 EEF1A1P5Q5VTE0 462 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 GTF2IRD2BQ6EKJ0 949 aa10.64□□□□□ -0.71
PDLIM5-208ENST00000504489 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms