RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PTDSS2Q9BVG9 487 aa11.89□□□□□ -0.51
PDLIM7-212ENST00000504380 CHID1Q9BWS9 393 aa11.89□□□□□ -0.51
PDLIM7-212ENST00000504380 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-212ENST00000504380 MAGIXQ9H6Y5 334 aa11.89□□□□□ -0.51
PDLIM7-212ENST00000504380 NMNAT1Q9HAN9 279 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-212ENST00000504380 C12orf10Q9HB07 376 aa11.89□□□□□ -0.51
PDLIM7-212ENST00000504380 FLNCQ14315 2725 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 FIGNL2A6NMB9 653 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 SULT2B1O00204 365 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 WDR1O75083 606 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 NPIPB7O75200 414 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 AQP8O94778 261 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 AHSA1O95433 338 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 GLI4P10075 376 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 FPR1P21462 350 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 ENPP1P22413 925 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 RRM2P31350 389 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 IDUAP35475 653 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 CASP6P55212 293 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 NUP107P57740 925 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 PMPCAQ10713 525 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 TRAM2Q15035 370 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 FGD3Q5JSP0 725 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 PDSS1Q5T2R2 415 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 PODNL1Q6PEZ8 512 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 C10orf53Q8N6V4 93 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 FNDC9Q8TBE3 224 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 STK35Q8TDR2 534 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 POTEKPQ9BYX7 375 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 VNN3Q9NY84 501 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 SEC14L4Q9UDX3 406 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 PRDM4Q9UKN5 801 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 MEMO1Q9Y316 297 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
PDLIM7-212ENST00000504380 POLEQ07864 2286 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 TRBV4-1A0A0J9YWV2 114 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 LIPT2A6NK58 231 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 RAMP1O60894 148 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 FKBP6O75344 327 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 TOXO94900 526 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 AKR7A3O95154 331 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 SYNGR4O95473 234 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 GPIP06744 558 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 RAP2AP10114 183 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 UMPSP11172 480 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 GABRA1P14867 456 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 ITGA2P17301 1181 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 IFNA8P32881 189 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 MAGEA2P43356 314 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 SEC23BQ15437 767 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 NSUN5P2Q63ZY6 315 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 B3GNT6Q6ZMB0 384 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 PIWIL3Q7Z3Z3 882 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 P4HA3Q7Z4N8 544 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 ADGRE4PQ86SQ3 457 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 CCDC103Q8IW40 242 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 TMEM239Q8WW34 195 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 MPP4Q96JB8 637 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 MOGAT1Q96PD6 335 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 DMRTA2Q96SC8 542 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 TTYH2Q9BSA4 534 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 TMEM43Q9BTV4 400 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 DENND2DQ9H6A0 471 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 C20orf141Q9NUB4 165 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 CCM2LQ9NUG4 571 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 CLCF1Q9UBD9 225 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 CLEC4AQ9UMR7 237 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 RP1L1Q8IWN7 2480 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 MYO7BQ6PIF6 2116 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 ARHGAP21Q5T5U3 1957 aa11.87□□□□□ -0.51
PDLIM7-212ENST00000504380 TRAV36DV7A0A075B6V5 113 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 A0A087WUU8 490 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 ENO4A6NNW6 628 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 E9PLN8 166 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 SMAD9O15198 467 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 TIPRLO75663 272 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 GADD45GO95257 159 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 PMS2P2O95744 297 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 CH25HO95992 272 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 BGLAPP02818 100 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 THRBP10828 461 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 FUT1P19526 365 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 AGFG1P52594 562 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 RAC3P60763 192 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 LAPTM4AQ15012 233 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF239Q16600 458 aaKnown RBP11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 EXOC3L2Q2M3D2 409 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 ZNF730Q6ZMV8 503 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
PDLIM7-212ENST00000504380 LRRC17Q8N6Y2 441 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms