RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PRR14LQ5THK1 2151 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 OR5H1A6NKK0 313 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 C5orf58C9J3I9 102 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 CLIC1O00299 241 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 GPIP06744 558 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 EDNRAP25101 427 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 ACAA2P42765 397 aaKnown RBP10.55□□□□□ -0.72
MED28-203ENST00000503945 MVDP53602 400 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 FAPQ12884 760 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 CEACAM7Q14002 265 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 RGNQ15493 299 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 MAPK11Q15759 364 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 ZNF672Q499Z4 452 aaPredicted RBP10.55□□□□□ -0.72
MED28-203ENST00000503945 LIN52Q52LA3 116 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 ZNF311Q5JNZ3 666 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 ABLIM2Q6H8Q1 611 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 KLHL17Q6TDP4 642 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 MAVSQ7Z434 540 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 DEPDC4Q8N2C3 294 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 CLIP4Q8N3C7 705 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 IGFBPL1Q8WX77 278 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 GTF2H4Q92759 462 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 MUS81Q96NY9 551 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 TAPBPLQ9BX59 468 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 FAIMQ9NVQ4 179 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 ADAM21Q9UKJ8 722 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 HIVEP2P31629 2446 aa10.55□□□□□ -0.72
MED28-203ENST00000503945 ANK3Q12955 4377 aaKnown RBP10.54□□□□□ -0.72
MED28-203ENST00000503945 A0A1W2PP18 115 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 A8MVM7 634 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 POLR3GO15318 223 aaPredicted RBP10.54□□□□□ -0.72
MED28-203ENST00000503945 RAD51DO75771 328 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 BCHEP06276 602 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 THBS1P07996 1170 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 IMPDH2P12268 514 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 NTF4P34130 210 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 IDUAP35475 653 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 IDH3AP50213 366 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 TGFBR3Q03167 851 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 PLAURQ03405 335 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 CHD3Q12873 2000 aaKnown RBP10.54□□□□□ -0.72
MED28-203ENST00000503945 PAQR6Q6TCH4 344 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 TMEM108Q6UXF1 575 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 GOLGA6L1Q8N7Z2 621 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 OR9I1Q8NGQ6 314 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 OR52N5Q8NH56 324 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 DYDC1Q8WWB3 177 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 SF3B5Q9BWJ5 86 aaKnown RBP10.54□□□□□ -0.72
MED28-203ENST00000503945 SPATA9Q9BWV2 254 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 ALG2Q9H553 416 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 BCL2L10Q9HD36 194 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 TCF7L2Q9NQB0 619 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 TAS2R16Q9NYV7 291 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 MGAT4BQ9UQ53 548 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 SLC9A8Q9Y2E8 581 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 USF3Q68DE3 2245 aa10.54□□□□□ -0.72
MED28-203ENST00000503945 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
MED28-203ENST00000503945 A0A096LPI6 279 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 ZC3H12DA2A288 527 aaKnown RBP10.53□□□□□ -0.72
MED28-203ENST00000503945 OVOL3O00110 214 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 RAMP1O60894 148 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 KRT33AO76009 404 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 AKR7A3O95154 331 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 VAMP5O95183 116 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 SOD3P08294 240 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 DANCRP0C864 163 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 COX5AP20674 150 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 PTAFRP25105 342 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 PPP2R2BQ00005 443 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 FADDQ13158 208 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 SLC17A1Q14916 467 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 OR7A5Q15622 319 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 GABRA6Q16445 453 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 GTDC1Q4AE62 458 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 OTUD3Q5T2D3 398 aaPredicted RBP10.53□□□□□ -0.72
MED28-203ENST00000503945 PRAMEF8Q5VWM4 474 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 PRAMEF7Q5VXH5 474 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 SLC2A7Q6PXP3 512 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 BLOC1S3Q6QNY0 202 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 CASP12Q6UXS9 341 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 ZNF836Q6ZNA1 936 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 CXXC5Q7LFL8 322 aaKnown RBP10.53□□□□□ -0.72
MED28-203ENST00000503945 AAED1Q7RTV5 226 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 GPAT4Q86UL3 456 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 TMEM99Q8N816 258 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 NEUROG1Q92886 237 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 AURKBQ96GD4 344 aaPredicted RBP10.53□□□□□ -0.72
MED28-203ENST00000503945 TMEM19Q96HH6 336 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 ATP6V1G3Q96LB4 118 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 CCDC28BQ9BUN5 200 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 TRIM2Q9C040 744 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 PAIP1Q9H074 479 aaKnown RBP10.53□□□□□ -0.72
MED28-203ENST00000503945 PIF1Q9H611 641 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 ADPRHL2Q9NX46 363 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 ZNF443Q9Y2A4 671 aaPredicted RBP10.53□□□□□ -0.72
MED28-203ENST00000503945 FLVCR1Q9Y5Y0 555 aa10.53□□□□□ -0.72
MED28-203ENST00000503945 LIPT2A6NK58 231 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 ABCD4O14678 606 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 ETS2P15036 469 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms