RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 C12orf10Q9HB07 376 aa11.38□□□□□ -0.59
HSPG2-213ENST00000498495 RASSF1Q9NS23 344 aa11.38□□□□□ -0.59
HSPG2-213ENST00000498495 ZNF226Q9NYT6 803 aa11.38□□□□□ -0.59
HSPG2-213ENST00000498495 ING1Q9UK53 422 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-213ENST00000498495 AP3M1Q9Y2T2 418 aa11.38□□□□□ -0.59
HSPG2-213ENST00000498495 GPR52Q9Y2T5 361 aa11.38□□□□□ -0.59
HSPG2-213ENST00000498495 A0A1B0GWA3 101 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 FAM221AA4D161 298 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 LIPT2A6NK58 231 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 ZNF716A6NP11 495 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 GPR171O14626 319 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 AHSA1O95433 338 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 PNMTP11086 282 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 HTR2AP28223 471 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 VEZF1Q14119 521 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 OR1Q1Q15612 314 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 ALG10BQ5I7T1 473 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 C1orf140Q5VVS0 124 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 TMEM225Q6GV28 225 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 PAQR6Q6TCH4 344 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 TFAP2EQ6VUC0 442 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 STAC2Q6ZMT1 411 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 CCDC80Q76M96 950 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 RANBP3LQ86VV4 465 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 LSRQ86X29 649 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 TREML1Q86YW5 311 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 CMTM5Q96DZ9 223 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 SLC47A1Q96FL8 570 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 ZC3HAV1LQ96H79 300 aaKnown RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 HOPXQ9BPY8 73 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 HDHD5Q9BXW7 423 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 CLEC4MQ9H2X3 399 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 ADPRHL2Q9NX46 363 aa11.37□□□□□ -0.59
HSPG2-213ENST00000498495 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 NOSIPQ9Y314 301 aaKnown RBP11.37□□□□□ -0.59
HSPG2-213ENST00000498495 MPDZO75970 2070 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 IGKV3D-15A0A087WSY6 115 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 CCT8L1PA6NM43 557 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 ZNF814B7Z6K7 855 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 MRPL33O75394 65 aaKnown RBP11.36□□□□□ -0.59
HSPG2-213ENST00000498495 AKR7A3O95154 331 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 GOSR1O95249 250 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 ADAP00813 363 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 IFNA14P01570 189 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 PPP3CBP16298 524 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 OR3A2P47893 321 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 OTUD3Q5T2D3 398 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-213ENST00000498495 FAM91A1Q658Y4 838 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 ABLIM2Q6H8Q1 611 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 ARPINQ7Z6K5 226 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 CXorf67Q86X51 503 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-213ENST00000498495 TMEM99Q8N816 258 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 OR2T12Q8NG77 320 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 GPR32P1Q8NGA4 272 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 MFSD8Q8NHS3 518 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 SLC38A4Q969I6 547 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 TAMM41Q96BW9 452 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 SLC25A36Q96CQ1 311 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 MCHR1Q99705 422 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 ARHGDIGQ99819 225 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 MYLK2Q9H1R3 596 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 PARPBPQ9NWS1 579 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 PRSS50Q9UI38 385 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 TESMINQ9Y4I5 508 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 CRYBG3Q68DQ2 2970 aa11.36□□□□□ -0.59
HSPG2-213ENST00000498495 ELOVL7A1L3X0 281 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 FAM220BPB1ANY3 271 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 TMEM229AB2RXF0 380 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 M0R3H8 397 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 OR2T1O43869 369 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 TPST2O60704 377 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 RAMP1O60894 148 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 NPIPB7O75200 414 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 PSMB1P20618 241 aaKnown RBP11.35□□□□□ -0.59
HSPG2-213ENST00000498495 GTF2E2P29084 291 aaKnown RBP11.35□□□□□ -0.59
HSPG2-213ENST00000498495 RPS5P46782 204 aaKnown RBP11.35□□□□□ -0.59
HSPG2-213ENST00000498495 SLC16A1P53985 500 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 EGR4Q05215 589 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 ITGADQ13349 1161 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 P2RY6Q15077 328 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 POU4F3Q15319 338 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 NRF1Q16656 503 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 SFRP5Q5T4F7 317 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 C5orf46Q6UWT4 87 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 C6orf89Q6UWU4 347 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.35□□□□□ -0.59
HSPG2-213ENST00000498495 GPAT4Q86UL3 456 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 CDC20BQ86Y33 519 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 SLC15A3Q8IY34 581 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 GABRG1Q8N1C3 465 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 UBE2J2Q8N2K1 259 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 STEAP2Q8NFT2 490 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 OR6T1Q8NGN1 323 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 VANGL1Q8TAA9 524 aaPredicted RBP11.35□□□□□ -0.59
HSPG2-213ENST00000498495 PROX1Q92786 737 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 APH1AQ96BI3 265 aa11.35□□□□□ -0.59
HSPG2-213ENST00000498495 SF3B5Q9BWJ5 86 aaKnown RBP11.35□□□□□ -0.59
HSPG2-213ENST00000498495 OR10A4Q9H209 315 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms