RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 ZNF19P17023 458 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 COX5AP20674 150 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 CALCRP30988 508 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 CCR1P32246 355 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 GRIA1P42261 906 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 BTDP43251 543 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 GSSP48637 474 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 CCT3P49368 545 aaKnown RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 CASP4P49662 377 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 CEBPDP49716 269 aaPredicted RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 GPM6AP51674 278 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 EFNB2P52799 333 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 RIPK1Q13546 671 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 CAPRIN1Q14444 709 aaKnown RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 NSUN5P1Q3KNT7 163 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 EOGTQ5NDL2 527 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 EFL1Q7Z2Z2 1120 aaKnown RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 KRTAP11-1Q8IUC1 163 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 ZCCHC7Q8N3Z6 543 aaKnown RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 FAM133AQ8N9E0 248 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 MFSD9Q8NBP5 474 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 OR4K14Q8NGD5 310 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 SCFD1Q8WVM8 642 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 ZBTB18Q99592 522 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 ZNF670Q9BS34 389 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 NT5C3AQ9H0P0 336 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 NHEJ1Q9H9Q4 299 aaPredicted RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 THUMPD1Q9NXG2 353 aaKnown RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 ADAM28Q9UKQ2 775 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 ZNF256Q9Y2P7 627 aaPredicted RBP2.33□□□□□ -2.04
PHC3-216ENST00000497171 UGT2A1Q9Y4X1 527 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 LRRK1Q38SD2 2015 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 A0A0G2JRQ6 117 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TCRBV9S1A1TA0A576 114 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 FAM231BA6NCW3 169 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 BTBD17A6NE02 478 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 A6NIZ1 184 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SURF6O75683 361 aaKnown RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 BBOX1O75936 387 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SUPT7LO94864 414 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 STAMBPO95630 424 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 LGI1O95970 557 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 IGHV3-48P01763 117 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 KLK3P07288 261 aaPredicted RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 FUT3P21217 361 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 COX7A1P24310 79 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 CD1BP29016 333 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 MAP3K8P41279 467 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SSR1P43307 286 aaKnown RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 HNRNPA3P51991 378 aaKnown RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 APOC4P55056 127 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 RAP1BP61224 184 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TNFRSF17Q02223 184 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TGFBR3Q03167 851 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TLE4Q04727 773 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 EGFEM1PQ0D2K5 195 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 PLD1Q13393 1074 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 OXA1LQ15070 435 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 IMMTQ16891 758 aaKnown RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 SFT2D3Q587I9 215 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 PAGE3Q5JUK9 113 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 MARCH8Q5T0T0 291 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 C1orf146Q5VVC0 180 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TIGD3Q6B0B8 471 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 OR52E8Q6IFG1 317 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 UQCC3Q6UW78 93 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 PGAP1Q75T13 922 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 GDPD3Q7L5L3 318 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SLC26A11Q86WA9 606 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 NBPF5PQ86XG9 351 aaPredicted RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 ECHDC2Q86YB7 292 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 ACOT4Q8N9L9 421 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 CATSPER1Q8NEC5 780 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 OR52H1Q8NGJ2 320 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 OR8J1Q8NGP2 316 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 FANK1Q8TC84 345 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SETD7Q8WTS6 366 aaKnown RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 FAM151AQ8WW52 585 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 OR1E3Q8WZA6 343 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SHC3Q92529 594 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 UBE2E3Q969T4 207 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 C10orf35Q96D05 121 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TECTBQ96PL2 329 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 TSG101Q99816 390 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 ARHGDIGQ99819 225 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SLC39A3Q9BRY0 314 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 ACTR6Q9GZN1 396 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 OR51J1Q9H342 316 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 RNF167Q9H6Y7 350 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 FOLH1BQ9HBA9 442 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 PLGRKTQ9HBL7 147 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 AIG1Q9NVV5 245 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 COX16Q9P0S2 106 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 SEC14L3Q9UDX4 400 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 NAP1L2Q9ULW6 460 aaPredicted RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 RPL36Q9Y3U8 105 aaKnown RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 KIF25-AS1Q9Y6Z4 181 aa2.32□□□□□ -2.04
PHC3-216ENST00000497171 ZNF646O15015 1829 aaPredicted RBP2.32□□□□□ -2.04
PHC3-216ENST00000497171 IGHV3OR16-13A0A075B7E8 117 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms