RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CHAC2Q8WUX2 184 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ACOT12Q8WYK0 555 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SLC41A2Q96JW4 573 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SYNDIG1Q9H7V2 258 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 EXPH5Q8NEV8 1989 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 A0A1B0GVT2 93 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 A0A1B0GX78 115 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 IDH3BO43837 385 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 SLC19A2O60779 497 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 ICOSLGO75144 302 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 OR2T7P0C7T2 308 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 FOLR1P15328 257 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 MYL9P24844 172 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 PTBP1P26599 531 aaKnown RBP eCLIP11.92□□□□□ -0.55e-10■■■■■ 40.3
GARNL3-220ENST00000496711 LCN1P31025 176 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 GRK6P43250 576 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 RFX2P48378 723 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 EFNA3P52797 238 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 SLC3A1Q07837 685 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 EBPQ15125 230 aaKnown RBP11.92□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF74Q16587 644 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 SLC35D3Q5M8T2 416 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 ARHGAP40Q5TG30 622 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 DMKNQ6E0U4 476 aaPredicted RBP11.92□□□□□ -0.5
GARNL3-220ENST00000496711 APOOLQ6UXV4 268 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 SLC35F2Q8IXU6 374 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 PRR22Q8IZ63 422 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 SYS1Q8N2H4 156 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 SLC25A45Q8N413 288 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 NPEPL1Q8NDH3 523 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 C17orf47Q8NEP4 570 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 IL17RDQ8NFM7 739 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 OR2T27Q8NH04 317 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 LIPHQ8WWY8 451 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 RASD2Q96D21 266 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 PGLYRP3Q96LB9 341 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 ADOQ96SZ5 270 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 NMNAT3Q96T66 252 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 NUDT9Q9BW91 350 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 KLHL1Q9NR64 748 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 HIF3AQ9Y2N7 669 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 PCDHGB7Q9Y5F8 929 aa11.92□□□□□ -0.5
GARNL3-220ENST00000496711 RP1P56715 2156 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 A8MU76 341 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SEC14L5O43304 696 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SPI1P17947 270 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 MST1P26927 711 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 IL12BP29460 328 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 PYCR1P32322 319 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NAA10P41227 235 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 CASP3P42574 277 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SLC6A8P48029 635 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 DIO1P49895 249 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ERVK-25P63136 954 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 PON3Q15166 354 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 CARTPTQ16568 116 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 TP53I3Q53FA7 332 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 VWA2Q5GFL6 755 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 YOD1Q5VVQ6 348 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 RPTNQ6XPR3 784 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 C9orf40Q8IXQ3 194 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 C10orf53Q8N6V4 93 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 OR51L1Q8NGJ5 315 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 MOSPD2Q8NHP6 518 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 DAZLQ92904 295 aaKnown RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 CLDN23Q96B33 292 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SOSTQ9BQB4 213 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 TTTY10Q9BZA0 68 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NMNAT2Q9BZQ4 307 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SLC22A4Q9H015 551 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 MARCH7Q9H992 704 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 MMP25Q9NPA2 562 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 COPS7AQ9UBW8 275 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SLC6A5Q9Y345 797 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 TNRC6BQ9UPQ9 1833 aaKnown RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 K7ESF4 209 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SC5DO75845 299 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 GIMD1P0DJR0 217 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 EVX1P49640 407 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NRG3P56975 720 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 OR2B6P58173 313 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ZP2Q05996 745 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 SELENBP1Q13228 472 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 IL10RAQ13651 578 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 RIN1Q13671 783 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NSDHLQ15738 373 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 CDONQ4KMG0 1287 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 IDNKQ5T6J7 187 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 AGAP6Q5VW22 663 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 WDR74Q6RFH5 385 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF517Q6ZMY9 492 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 TPRA1Q86W33 373 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NR2C2APQ86WQ0 139 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF563Q8TA94 476 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms