RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 ALDH6A1Q02252 535 aaKnown RBP13.55□□□□□ -0.24
GAPDH-210ENST00000496049 LAPTM4AQ15012 233 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 SEC23BQ15437 767 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 WDR88Q6ZMY6 472 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 TMEM179BQ7Z7N9 219 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 NRMQ8IXM6 262 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 TMEM251Q8N6I4 163 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 OR9Q2Q8NGE9 314 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 SFXN2Q96NB2 322 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 KLHDC3Q9BQ90 382 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 FUZQ9BT04 418 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
GAPDH-210ENST00000496049 TRAV36DV7A0A075B6V5 113 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 PDLIM1O00151 329 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 AHSA1O95433 338 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 IGF2P01344 180 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 CRYABP02511 175 aaKnown RBP13.54□□□□□ -0.24
GAPDH-210ENST00000496049 RFPL3SP0C7P2 107 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 IFI30P13284 250 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 GSTM3P21266 225 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
GAPDH-210ENST00000496049 MAGEA5P43359 124 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 RAD23AP54725 363 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 CRYZQ08257 329 aaKnown RBP13.54□□□□□ -0.24
GAPDH-210ENST00000496049 RFX4Q33E94 735 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 RPUSD3Q6P087 351 aaKnown RBP13.54□□□□□ -0.24
GAPDH-210ENST00000496049 FAHD1Q6P587 224 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 LINC00114Q6XXX2 140 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 HS3ST5Q8IZT8 346 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 RBMXL3Q8N7X1 1067 aaKnown RBP13.54□□□□□ -0.24
GAPDH-210ENST00000496049 MAGEE2Q8TD90 523 aaPredicted RBP13.54□□□□□ -0.24
GAPDH-210ENST00000496049 GNPDA2Q8TDQ7 276 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 PNPLA2Q96AD5 504 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 FEVQ99581 238 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 EXO5Q9H790 373 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 KRT84Q9NSB2 600 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 USE1Q9NZ43 259 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 POFUT2Q9Y2G5 429 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 APCP25054 2843 aa13.54□□□□□ -0.24
GAPDH-210ENST00000496049 TMEM72A0PK05 275 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 OR2M5A3KFT3 312 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SOCS2O14508 198 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 OR2T1O43869 369 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PIP5K1CO60331 668 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
GAPDH-210ENST00000496049 TFPIP10646 304 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PTNP21246 168 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 CBLP22681 906 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 FPR3P25089 353 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 CLK1P49759 484 aaKnown RBP13.53□□□□□ -0.24
GAPDH-210ENST00000496049 CTBP2P56545 445 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 NUP107P57740 925 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PPP2R2BQ00005 443 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 IL1RL1Q01638 556 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PRKCDQ05655 676 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SLC10A1Q14973 349 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 TMEM44Q2T9K0 475 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SYT14P1Q58G82 188 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 WIPI1Q5MNZ9 446 aaPredicted RBP13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SLC6A19Q695T7 634 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PPP4R4Q6NUP7 873 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PGBD2Q6P3X8 592 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 YRDCQ86U90 279 aaKnown RBP13.53□□□□□ -0.24
GAPDH-210ENST00000496049 ADGRG3Q86Y34 549 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 POC1BQ8TC44 478 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 NRG4Q8WWG1 115 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 BPIFA2Q96DR5 249 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 SGTBQ96EQ0 304 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 FAM46AQ96IP4 442 aaKnown RBP13.53□□□□□ -0.24
GAPDH-210ENST00000496049 RDH12Q96NR8 316 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 DGCR6LQ9BY27 220 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 COQ10BQ9H8M1 238 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 PAPOLBQ9NRJ5 636 aaKnown RBP13.53□□□□□ -0.24
GAPDH-210ENST00000496049 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
GAPDH-210ENST00000496049 IGKV1D-42A0A075B6H8 117 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 H3BML4 177 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 ZIC3O60481 467 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 MT-ATP6P00846 226 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 ALPLP05186 524 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 PRKACGP22612 351 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 GNLYP22749 145 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 CHMP24386 653 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 IDUAP35475 653 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 GPR4P46093 362 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 HSPA13P48723 471 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 MLLT10P55197 1068 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 PMP22Q01453 160 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 MFSD13AQ14CX5 517 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 C1orf140Q5VVS0 124 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
GAPDH-210ENST00000496049 C1orf94Q6P1W5 598 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.25
GAPDH-210ENST00000496049 GALNT4Q8N4A0 578 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms