RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 ATP6V1C2Q8NEY4 427 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 OR9A2Q8NGT5 310 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 RAB39BQ96DA2 213 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 CNRIP1Q96F85 164 aaPredicted RBP8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 CERS2Q96G23 380 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 WWC2-AS2Q96NR7 200 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 SERPINI1Q99574 410 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 KATNB1Q9BVA0 655 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 FAIM2Q9BWQ8 316 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 DERL2Q9GZP9 239 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 COQ10BQ9H8M1 238 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 FN3KRPQ9HA64 309 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 PLAC1Q9HBJ0 212 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC17A5Q9NRA2 495 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 AHSPQ9NZD4 102 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 MALT1Q9UDY8 824 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 NOSIPQ9Y314 301 aaKnown RBP8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 ANGPTL3Q9Y5C1 460 aa8.27□□□□□ -1.09
SMARCAL1-213ENST00000496037 FAM95CA0A1B0GW59 222 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 hCG_1807616A0A1W2PRN6 198 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 AQP12BA6NM10 295 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 H0YIV9 168 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 K7EPI3 171 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 WNT9BO14905 357 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 PLPP2O43688 288 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SEC31AO94979 1220 aaKnown RBP8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 ADRA2AP08913 450 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 NPR2P20594 1047 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 MAGEA3P43357 314 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 KCNJ1P48048 391 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 RAG2P55895 527 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 RAC3P60763 192 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 LMO4P61968 165 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC25A3Q00325 362 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC18A2Q05940 514 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC9B1Q4ZJI4 515 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 HSP90B2PQ58FF3 399 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SPANXN3Q5MJ09 141 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 TEDDM1Q5T9Z0 273 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 C9orf135Q5VTT2 229 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 RUSC1-AS1Q66K80 236 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 C11orf87Q6NUJ2 197 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 C11orf88Q6PI97 169 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 GATSQ8NAP1 163 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 POC1BQ8TC44 478 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 GTF3AQ92664 365 aaKnown RBP8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZBTB9Q96C00 473 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SH3YL1Q96HL8 342 aaPredicted RBP8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 HES6Q96HZ4 224 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 MEGF10Q96KG7 1140 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SIGLEC10Q96LC7 697 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC38A2Q96QD8 506 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF665Q9H7R5 613 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 ADAM29Q9UKF5 820 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 UTS2RQ9UKP6 389 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 NUP50Q9UKX7 468 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 BLOC1S6Q9UL45 172 aa8.26□□□□□ -1.09
SMARCAL1-213ENST00000496037 PIP5K1BO14986 540 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 CRYBA1P05813 215 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ARL3P36405 182 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 GP5P40197 560 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC12A2P55011 1212 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 TMEM33P57088 247 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 TAS2R39P59534 338 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 MALLQ13021 153 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 HLXQ14774 488 aaPredicted RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 CPSF6Q16630 551 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ELFN2Q5R3F8 820 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 LIPJQ5W064 366 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 REP15Q6BDI9 236 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 C16orf87Q6PH81 154 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 APOOLQ6UXV4 268 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 TSPYL5Q86VY4 417 aaPredicted RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 RIBC1Q8N443 379 aaPredicted RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 OR4F15Q8NGB8 312 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 CKAP2Q8WWK9 683 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF75CPQ92670 426 aaPredicted RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 RDH5Q92781 318 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF681Q96N22 645 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ANKRD27Q96NW4 1050 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 BBS4Q96RK4 519 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 DOK1Q99704 481 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF416Q9BWM5 594 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 PARD6BQ9BYG5 372 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 HEATR1Q9H583 2144 aaKnown RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF442Q9H7R0 627 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 C3orf14Q9HBI5 128 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 POPDC3Q9HBV1 291 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF275Q9NSD4 429 aaPredicted RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 GIMAP4Q9NUV9 329 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 PLEK2Q9NYT0 353 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 UPB1Q9UBR1 384 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 RAB21Q9UL25 225 aa8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 DYNC2H1Q8NCM8 4307 aaKnown RBP8.25□□□□□ -1.09
SMARCAL1-213ENST00000496037 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 IGHV1-18A0A0C4DH31 117 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 CLPSL1A2RUU4 121 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 HMX3A6NHT5 357 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms